RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 MAPK11Q15759 364 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ZNF618Q5T7W0 954 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 METTL13Q8N6R0 699 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ZNF555Q8NEP9 628 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 SLC35G2Q8TBE7 412 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 GLG1Q92896 1179 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 A0A0U1RQJ8 604 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 LOC100653049A0A140TA62 436 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 KRT34O76011 436 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 KRT36O76013 467 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TRPM2O94759 1503 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 JAK1P23458 1154 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TNFRSF8P28908 595 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MROH7Q68CQ1 1323 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 NAT14Q8WUY8 206 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 GLT8D2Q9H1C3 349 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 GOLPH3Q9H4A6 298 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 CTNNAL1Q9UBT7 734 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 DSEQ9UL01 958 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TELO2Q9Y4R8 837 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 RBM47A0AV96 593 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 CCR3P51677 355 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 PDK3Q15120 406 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 AGR3Q8TD06 166 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 CCDC127Q96BQ5 260 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 DGCR14Q96DF8 476 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MKNK1Q9BUB5 465 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TRIM39Q9HCM9 518 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 PREBQ9HCU5 417 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MYL2P10916 166 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 IFI35P80217 286 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 RASA2Q15283 850 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 SKA1Q96BD8 255 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ECSITQ9BQ95 431 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TRNAU1APQ9NX07 287 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
CDK5RAP2-201ENST00000349780 CYFIP1Q7L576 1253 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TMC3Q7Z5M5 1100 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 HPS1Q92902 700 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 DEPDC7Q96QD5 511 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TMEM79Q9BSE2 394 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 IL25Q9H293 177 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TTLL3Q9Y4R7 772 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MED14O60244 1454 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 BPIFB4P59827 614 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ATL2Q8NHH9 583 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MCRS1Q96EZ8 462 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 PPP1R36Q96LQ0 422 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 AFF2P51816 1311 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TBC1D12O60347 775 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ELOA2Q8IYF1 753 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 KLF6Q99612 283 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 SHCBP1LQ9BZQ2 653 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 KIAA1683Q9H0B3 1180 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ZSWIM5Q9P217 1185 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 WDR62O43379 1518 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 NFKBIAP25963 317 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ITGA8P53708 1063 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 GLYCTKQ8IVS8 523 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TBC1D10AQ9BXI6 508 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 VPS11Q9H270 941 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 IDH3BO43837 385 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TRIM49P0CI25 452 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TRIM49CP0CI26 452 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 GRK2P25098 689 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 PMLP29590 882 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 CDC27P30260 824 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TMPRSS6Q8IU80 811 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 GLMNQ92990 594 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 GCNAQ96QF7 691 aa12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 CNOT8Q9UFF9 292 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 NBNO60934 754 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 RAG1P15918 1043 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MAGEA4P43358 317 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 TRAF2Q12933 501 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 LIN52Q52LA3 116 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 ZCCHC7Q8N3Z6 543 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 NFATC2IPQ8NCF5 419 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 POMGNT1Q8WZA1 660 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 RMND5BQ96G75 393 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 COX4I2Q96KJ9 171 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 DMTF1Q9Y222 760 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 MATN2O00339 956 aa12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 FTLP02792 175 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP2-201ENST00000349780 FCER1AP12319 257 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms