RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 SV2AQ7L0J3 742 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 C18orf8Q96DM3 657 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 SAAL1Q96ER3 474 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 GRHL1Q9NZI5 618 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 TMEM150BA6NC51 233 aa16.58■□□□□ 0.24
TNFSF13-202ENST00000349228 FSCN2O14926 492 aa16.58■□□□□ 0.24
TNFSF13-202ENST00000349228 STBD1O95210 358 aa16.58■□□□□ 0.24
TNFSF13-202ENST00000349228 MAGOHP61326 146 aaKnown RBP16.58■□□□□ 0.24
TNFSF13-202ENST00000349228 CLDN10P78369 228 aa16.58■□□□□ 0.24
TNFSF13-202ENST00000349228 ADCY2Q08462 1091 aa16.58■□□□□ 0.24
TNFSF13-202ENST00000349228 TAS1R2Q8TE23 839 aa16.58■□□□□ 0.24
TNFSF13-202ENST00000349228 EXTL3O43909 919 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 RARGP13631 454 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 BACE1P56817 501 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 MTMR2Q13614 643 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 FBXO25Q8TCJ0 367 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 SH2D3AQ9BRG2 576 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 RABEP2Q9H5N1 569 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 EFCC1Q9HA90 598 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 ATP6V0A4Q9HBG4 840 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 C1orf112Q9NSG2 853 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 EP400Q96L91 3159 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 KCNA2P16389 499 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 RPL21P46778 160 aaKnown RBP16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 MARCKSL1P49006 195 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 WDR44Q5JSH3 913 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 SLC39A4Q6P5W5 647 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 C15orf39Q6ZRI6 1047 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 ART4Q93070 314 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 ARHGAP28Q9P2N2 729 aa16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.57■□□□□ 0.24
TNFSF13-202ENST00000349228 C5orf60A6NFR6 353 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 HNRNPDLO14979 420 aaKnown RBP16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ATP2A1O14983 1001 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ZNF862O60290 1169 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ECEL1O95672 775 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 AGTP01019 485 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 COPB2P35606 906 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 SEC24CP53992 1094 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 PSMD6Q15008 389 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 XKR3Q5GH77 459 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 TTC27Q6P3X3 843 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 TRIM72Q6ZMU5 477 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 BSNDQ8WZ55 320 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ATG4CQ96DT6 458 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ROPN1BQ9BZX4 212 aaPredicted RBP16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 EPB41L4BQ9H329 900 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ROPN1Q9HAT0 212 aaPredicted RBP16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 PPANQ9NQ55 473 aaKnown RBP16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 CYP26B1Q9NR63 512 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 HOMER3Q9NSC5 361 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 WHRNQ9P202 907 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 SLC9A2Q9UBY0 812 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ADAMTS5Q9UNA0 930 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 BCS1LQ9Y276 419 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
TNFSF13-202ENST00000349228 ANKRD65E5RJM6 399 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 FSBPO95073 299 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 RARAP10276 462 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 MAPK4P31152 587 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 CALCOCO2Q13137 446 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 SIX1Q15475 284 aaPredicted RBP16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 SLFN12LQ6IEE8 588 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 AADACL2Q6P093 401 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 TRMT10CQ7L0Y3 403 aaKnown RBP16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 SCYL3Q8IZE3 742 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 REPS2Q8NFH8 660 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 GRK7Q8WTQ7 553 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 PSPC1Q8WXF1 523 aaKnown RBP16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 CYFIP2Q96F07 1278 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 BICD1Q96G01 975 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 POP1Q99575 1024 aaKnown RBP16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 JPH1Q9HDC5 661 aaPredicted RBP16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 PIM2Q9P1W9 311 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 POTEJP0CG39 1038 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 UNGP13051 313 aaPredicted RBP16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 KRT5P13647 590 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 ITIH2P19823 946 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 DSG3P32926 999 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 CAV1Q03135 178 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 SWSAP1Q6NVH7 229 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 MCOLN2Q8IZK6 566 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 ZNF280CQ8ND82 737 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 P3H4Q92791 437 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 TATDN2Q93075 761 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 RNF25Q96BH1 459 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms