RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 RNPEPQ9H4A4 650 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 LY9Q9HBG7 655 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 SH3GLB2Q9NR46 395 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 HOXC10Q9NYD6 342 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 PGRMC1O00264 195 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 ITIH4Q14624 930 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 ERCC6L2Q5T890 1561 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 RESP18Q5W5W9 173 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 TUBGCP3Q96CW5 907 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 MRPL47Q9HD33 250 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 DLGAP3O95886 979 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 FOSL1P15407 271 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 SWSAP1Q6NVH7 229 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 RHPN2Q8IUC4 686 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 MB21D1Q8N884 522 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 PP2D1A8MPX8 630 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 FESP07332 822 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 JAK3P52333 1124 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 SCARF1Q14162 830 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 PADI6Q6TGC4 694 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 HEATR4Q86WZ0 1026 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 SCAF8Q9UPN6 1271 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 TNS3Q68CZ2 1445 aa11.72□□□□□ -0.53
SMARCE1-202ENST00000348513 GCLMP48507 274 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 IL1RL1Q01638 556 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 AP3B2Q13367 1082 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 KRR1Q13601 381 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 KDM7AQ6ZMT4 941 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 PODNQ7Z5L7 613 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 ZMYND12Q9H0C1 365 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 TRIM39Q9HCM9 518 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 MOSPD1Q9UJG1 213 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 SSTR3P32745 418 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 NUP107P57740 925 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 ERICH1Q86X53 443 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 PHC3Q8NDX5 983 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 ZCWPW1Q9H0M4 648 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 ATPIF1Q9UII2 106 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 COPG1Q9Y678 874 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 ATP8B3O60423 1300 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 CLDN3O15551 220 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 FOXO4P98177 505 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 THOC5Q13769 683 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 TWF2Q6IBS0 349 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 TAS2R42Q7RTR8 314 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 GOLPH3LQ9H4A5 285 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 PPME1Q9Y570 386 aa11.71□□□□□ -0.53
SMARCE1-202ENST00000348513 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 F5H423 210 aaPredicted RBP11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 ABLIM1O14639 778 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 PSMA2P25787 234 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 EPHB1P54762 984 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 ZBED6P86452 979 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 ARHGAP4P98171 946 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 CYTH1Q15438 398 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 PPP6R3Q5H9R7 873 aaPredicted RBP11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 ARL6IP4Q66PJ3 421 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 LRIG3Q6UXM1 1119 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 QKIQ96PU8 341 aaKnown RBP eCLIP11.71□□□□□ -0.542e-13■■■■■ 29.8
SMARCE1-202ENST00000348513 ZNF446Q9NWS9 450 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 A2ML1A8K2U0 1454 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 CYTH3O43739 400 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 NDUFA10O95299 355 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 KCNJ6P48051 423 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 BTKQ06187 659 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 ZNF568Q3ZCX4 644 aa11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 HBS1LQ9Y450 684 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-202ENST00000348513 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 CLTCL1P53675 1640 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 GPC4O75487 556 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 GRK2P25098 689 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ASPHQ12797 758 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 B3GNT6Q6ZMB0 384 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 CYFIP1Q7L576 1253 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 DTX3LQ8TDB6 740 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 GANCQ8TET4 914 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 FAM84BQ96KN1 310 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 MMP19Q99542 508 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ZNF302Q9NR11 478 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 GABBR1Q9UBS5 961 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 DNAJC12Q9UKB3 198 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 SNX5Q9Y5X3 404 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 MYO3BQ8WXR4 1341 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 F5H6K3 240 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ZCCHC18P0CG32 403 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 KLRC3Q07444 240 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 C16orf72Q14CZ0 275 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms