RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CES5AQ6NT32 575 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 FUT10Q6P4F1 479 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 TMEM184AQ6ZMB5 413 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 BCL7CQ8WUZ0 217 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 DHX58Q96C10 678 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 DDX27Q96GQ7 796 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 SPATA32Q96LK8 384 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 TNMDQ9H2S6 317 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 MAGEF1Q9HAY2 307 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 DZANK1Q9NVP4 752 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 PCDHB13Q9Y5F0 798 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 MYMKA6NI61 221 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 C2CD2LO14523 706 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 PTGESO14684 152 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 MBTPS2O43462 519 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 XPOTO43592 962 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 CLTAP09496 248 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 IL9P15248 144 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 GTF2BQ00403 316 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 DLX2Q07687 328 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 PKP1Q13835 747 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 POSTNQ15063 836 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 PTPN14Q15678 1187 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 GLRA4Q5JXX5 417 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 PDXDC1Q6P996 788 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 CEP120Q8N960 986 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 AUTS2Q8WXX7 1259 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 ZBTB45Q96K62 511 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 ST6GALNAC4Q9H4F1 302 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 PLEKHA5Q9HAU0 1116 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 PANK4Q9NVE7 773 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 HCFC2Q9Y5Z7 792 aa17.22■□□□□ 0.35
TSPAN4-201ENST00000346501 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 TCF20Q9UGU0 1960 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 B3GAT3O94766 335 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 GCNT3O95395 438 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 GLP2RO95838 553 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 PIGRP01833 764 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 NMT1P30419 496 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 PPP2R3AQ06190 1150 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 ANKRD54Q6NXT1 300 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 DCLRE1AQ6PJP8 1040 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 MAP4K3Q8IVH8 894 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 GPR65Q8IYL9 337 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 SYCP3Q8IZU3 236 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 SMRP1Q8NCR6 262 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 MSLNLQ96KJ4 702 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 SNX27Q96L92 541 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 ACCSQ96QU6 501 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 TSPAN18Q96SJ8 248 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 MSTO1Q9BUK6 570 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 RPF1Q9H9Y2 349 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 CLEC1BQ9P126 229 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 PCDHA7Q9UN72 937 aa17.21■□□□□ 0.35
TSPAN4-201ENST00000346501 ATG2AQ2TAZ0 1938 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 OGTO15294 1046 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 DSG1Q02413 1049 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 ITIH3Q06033 890 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 SHC4Q6S5L8 630 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 ZNF720Q7Z2F6 126 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 CEP57Q86XR8 500 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 PPP1R10Q96QC0 940 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 OLFML3Q9NRN5 406 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 NUB1Q9Y5A7 615 aa17.2■□□□□ 0.34
TSPAN4-201ENST00000346501 TMEM189-UBE2V1I3L0A0 370 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 POLR2DO15514 142 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 KCNE1P15382 129 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 RPL9P32969 192 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 ASIC1P78348 528 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 NUCB2P80303 420 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 ZC2HC1CQ53FD0 456 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 FAM171A1Q5VUB5 890 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 ADALQ6DHV7 355 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 ADHFE1Q8IWW8 467 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 CD302Q8IX05 232 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 GJD3Q8N144 294 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 HASPINQ8TF76 798 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 RIN2Q8WYP3 895 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 RABGGTAQ92696 567 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 DNAJC19Q96DA6 116 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 RIPOR3Q96MK2 946 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 NECAB3Q96P71 396 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 VN1R3Q9BXE9 311 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 GPR62Q9BZJ7 368 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 TMEM206Q9H813 350 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 TBC1D7Q9P0N9 293 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 CNTN3Q9P232 1028 aa17.19■□□□□ 0.34
TSPAN4-201ENST00000346501 USP15Q9Y4E8 981 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms