RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TREHO43280 583 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 LRRN2O75325 713 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 GPR32O75388 356 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 CSDE1O75534 798 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 ARF4P18085 180 aaPredicted RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 CCND3P30281 292 aaPredicted RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 MFAP3P55082 362 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 PTK2Q05397 1052 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 PCBP1Q15365 356 aaKnown RBP eCLIP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 ENOX2Q16206 610 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 SLC18A3Q16572 532 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 KYAT1Q16773 422 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 KIZQ2M2Z5 673 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 WDR49Q8IV35 697 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 THNSL1Q8IYQ7 743 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 ERO1AQ96HE7 468 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 IFIH1Q9BYX4 1025 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 TSGA10Q9BZW7 698 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 PDZD7Q9H5P4 517 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 LUC7LQ9NQ29 371 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 PTPRJQ12913 1337 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 KRT86O43790 486 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 EVI5O60447 810 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 TSPAN1O60635 241 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 ADAMTS4O75173 837 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 POU5F1Q01860 360 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 GFPT1Q06210 699 aaPredicted RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 BIRC3Q13489 604 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 ARHGEF6Q15052 776 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 TDRD10Q5VZ19 366 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 LMBRD2Q68DH5 695 aaPredicted RBP23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 VPS36Q86VN1 386 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 RAET1EQ8TD07 263 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 DNAJB3Q8WWF6 145 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 MYO1AQ9UBC5 1043 aa23.19■■□□□ 1.3
TSPAN3-202ENST00000346495 TRIP12Q14669 1992 aaPredicted RBP23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 SCN10AQ9Y5Y9 1956 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 PIK3CAP42336 1068 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 NCBP1Q09161 790 aaKnown RBP23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 WDR44Q5JSH3 913 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 CCDC122Q5T0U0 273 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 ENOSF1Q7L5Y1 443 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 ZNF571Q7Z3V5 609 aaPredicted RBP23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 CDR2LQ86X02 465 aaPredicted RBP23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 PPM1KQ8N3J5 372 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 NME8Q8N427 588 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 PXYLP1Q8TE99 480 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 CPB2Q96IY4 423 aa23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.18■■□□□ 1.3
TSPAN3-202ENST00000346495 IL18RAPO95256 599 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 HLA-DRAP01903 254 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 PNMA6AP0CW24 399 aaPredicted RBP23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 MAGEA1P43355 309 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 ZNF200P98182 395 aaPredicted RBP23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 TMEM62Q0P6H9 643 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 KIF5AQ12840 1032 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 MAP3K21Q5TCX8 1036 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 CXCL17Q6UXB2 119 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 HELQQ8TDG4 1101 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 ADPGKQ9BRR6 497 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 RPF1Q9H9Y2 349 aaKnown RBP23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 C1orf112Q9NSG2 853 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 ANK1P16157 1881 aa23.17■■□□□ 1.3
TSPAN3-202ENST00000346495 A0A1B0GUA9 196 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 FOXN3O00409 490 aaPredicted RBP23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 FKTNO75072 461 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 CLTAP09496 248 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 CST5P28325 142 aaPredicted RBP23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 CASQ1P31415 396 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 C10orf76Q5T2E6 689 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 APBB1IPQ7Z5R6 666 aaPredicted RBP23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 KLHDC9Q8NEP7 349 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 FAM212AQ96EL1 285 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 GINS2Q9Y248 185 aa23.16■■□□□ 1.3
TSPAN3-202ENST00000346495 A0A087X0T9 212 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 PHACTR2O75167 634 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 VNN1O95497 513 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 FAM228BP0C875 321 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 DARSP14868 501 aaKnown RBP23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 DUOXA2Q1HG44 320 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 TAF2Q6P1X5 1199 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 CEP120Q8N960 986 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 OR5B17Q8NGF7 314 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 KREMEN1Q96MU8 473 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 OSMRQ99650 979 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 SAGE1Q9NXZ1 904 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 ADAMTS1Q9UHI8 967 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 GTF2IRD1Q9UHL9 959 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 GUCA1BQ9UMX6 200 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 PJA2O43164 708 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 B4GALT4O60513 344 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 ABL1P00519 1130 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 TERF1P54274 439 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 OSTNP61366 133 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 GCNT1Q02742 428 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 BMS1Q14692 1282 aaKnown RBP23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 NBPF20Q3BBV1 942 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 DCAF4L1Q3SXM0 396 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 ZNF569Q5MCW4 686 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 CATSPER4Q7RTX7 472 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms