RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 AFAP1L1Q8TED9 768 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 CDK15Q96Q40 435 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 NAPGQ99747 312 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 PTPN18Q99952 460 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 INTS2Q9H0H0 1204 aaKnown RBP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ARHGAP28Q9P2N2 729 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 SIP14410 1827 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 LILRA1O75019 489 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ADH1CP00326 375 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 MAPK1P28482 360 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ADORA2AP29274 412 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ARL2P36404 184 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 KIF5AQ12840 1032 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 DRP2Q13474 957 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ELF2Q15723 593 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 SNRNP35Q16560 246 aaKnown RBP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 SPRYD7Q5W111 196 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ARMCX2Q7L311 632 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ZNF571Q7Z3V5 609 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ANKRD23Q86SG2 305 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 C2orf69Q8N8R5 385 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 ANKRD7Q92527 254 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 GLG1Q92896 1179 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 NRBP2Q9NSY0 501 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 FBXL5Q9UKA1 691 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 SLC45A1Q9Y2W3 748 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 CENPFP49454 3210 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 A0A087X0T9 212 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 RBAK-RBAKDNI3L0D1 243 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 NOP56O00567 594 aaKnown RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 ENC1O14682 589 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 HNRNPDLO14979 420 aaKnown RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 INHAP05111 366 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 FAM228BP0C875 321 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 TXNP10599 105 aaKnown RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 FKBP1BP68106 108 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 CCNA1P78396 465 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 GABPB1Q06547 395 aaPredicted RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 ERCC6LQ2NKX8 1250 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 ZNF792Q3KQV3 632 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 GJC2Q5T442 439 aaPredicted RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 KCNV1Q6PIU1 500 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 MNS1Q8NEH6 495 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 LMO3Q8TAP4 145 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 GIPC2Q8TF65 315 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 SLC7A3Q8WY07 619 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 POMGNT1Q8WZA1 660 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 BICD1Q96G01 975 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 SPATA33Q96N06 139 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 SAP130Q9H0E3 1048 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 AZI2Q9H6S1 392 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 HDAC6Q9UBN7 1215 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 DNAJC12Q9UKB3 198 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 LRRIQ4A6NIV6 560 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 ASB14A6NK59 587 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 MAPK13O15264 365 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 TADA3O75528 432 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 GFPT2O94808 682 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 SLC18A3Q16572 532 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 CST9Q5W186 159 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 CCDC127Q96BQ5 260 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 POP1Q99575 1024 aaKnown RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 TSGA10Q9BZW7 698 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 GPR88Q9GZN0 384 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 TMEM117Q9H0C3 514 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 NMRK2Q9NPI5 230 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.816e-6■■■■■ 48.1
ATG4A-202ENST00000345734 TOPORSQ9NS56 1045 aaPredicted RBP10□□□□□ -0.81
ATG4A-202ENST00000345734 APEX2Q9UBZ4 518 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 ADAMTS1Q9UHI8 967 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 SALL4Q9UJQ4 1053 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 MYO6Q9UM54 1294 aa10□□□□□ -0.81
ATG4A-202ENST00000345734 A0A1W2PRU2 124 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 ZBTB42B2RXF5 422 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 PJA2O43164 708 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 SIAH2O43255 324 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 MAFO75444 373 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-202ENST00000345734 MOCS3O95396 460 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 ATP1A1P05023 1023 aaKnown RBP9.99□□□□□ -0.81
ATG4A-202ENST00000345734 EDN1P05305 212 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 RPIAP49247 311 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 AMPD2Q01433 879 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 TTLL4Q14679 1199 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 DRAP1Q14919 205 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-202ENST00000345734 PLCB4Q15147 1175 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 EPC2Q52LR7 807 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 BRDTQ58F21 947 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-202ENST00000345734 TAPT1Q6NXT6 567 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 DNAAF5Q86Y56 855 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 DEPTORQ8TB45 409 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 FBXL18Q96ME1 805 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 PACSIN1Q9BY11 444 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 STK33Q9BYT3 514 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 MORF4L1Q9UBU8 362 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 CDC23Q9UJX2 597 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 CAPN6Q9Y6Q1 641 aa9.99□□□□□ -0.81
ATG4A-202ENST00000345734 LRRIQ3A6PVS8 624 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms