RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 SCN4BQ8IWT1 228 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 OXER1Q8TDS5 423 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 UQCC2Q9BRT2 126 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TMEM206Q9H813 350 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 RPF1Q9H9Y2 349 aaKnown RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CD248Q9HCU0 757 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 KPNA7A9QM74 516 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 E5RI56 91 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 K7ERI5 159 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 SH2B2O14492 632 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TYK2P29597 1187 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CCDC153Q494R4 210 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 OR9Q1Q8NGQ5 310 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 IFT43Q96FT9 208 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 AK8Q96MA6 479 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TUBA1CQ9BQE3 449 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 THTPAQ9BU02 230 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 SIK2Q9H0K1 926 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 MID2Q9UJV3 735 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 LRFN2Q9ULH4 789 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CBY1Q9Y3M2 126 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 PTPRKQ15262 1439 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 SSH2Q76I76 1423 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 PDE8BO95263 885 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TTLL1O95922 423 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 FTLP02792 175 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 PTK2BQ14289 1009 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 HIC1Q14526 733 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 KCTD2Q14681 263 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CNGA2Q16280 664 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CCDC149Q6ZUS6 474 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 SFR1Q86XK3 245 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 PLD3Q8IV08 490 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 ZBTB38Q8NAP3 1195 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF473Q8WTR7 871 aaKnown RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 AGAP3Q96P47 875 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 FAM213AQ9BRX8 229 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TRIM51Q9BSJ1 452 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 NDFIP2Q9NV92 336 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TRIM10Q9UDY6 481 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 MAPKBP1O60336 1514 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 PRR23D1E9PI22 279 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CCDC188H7C350 402 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 MEFVO15553 781 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TSC22D2O75157 780 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 RAD17O75943 681 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 EIF2S1P05198 315 aaKnown RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 PRR23D2P0DMB1 279 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 VDRP11473 427 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CHN1P15882 459 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 MAPK9P45984 424 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 SEC24CP53992 1094 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 GPC5P78333 572 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 KCNH2Q12809 1159 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 RARS2Q5T160 578 aaKnown RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 HELQQ8TDG4 1101 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 HPS3Q969F9 1004 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 MAGEF1Q9HAY2 307 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 DLGAP2Q9P1A6 1054 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 SEPT3Q9UH03 358 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TRIM33Q9UPN9 1127 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TRPM2O94759 1503 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TTC26A0AVF1 554 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 NFIBO00712 420 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 S100A6P06703 90 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CACNB3P54284 484 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 SESN2P58004 480 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 FAM182BQ5T319 152 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 IZUMO3Q5VZ72 239 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 TAS2R42Q7RTR8 314 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 RHPN2Q8IUC4 686 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 CLEC4FQ8N1N0 589 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 AIPL1Q9NZN9 384 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.92□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF804BA4D1E1 1349 aa6.92□□□□□ -1.3
PCDH18-201ENST00000344876 LOC100653049A0A140TA62 436 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 LAD1O00515 517 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 AIM2O14862 343 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SLC16A4O15374 487 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 KRT34O76011 436 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SERPINB2P05120 415 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 FGFR2P21802 821 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 USPL1Q5W0Q7 1092 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 RRM2BQ7LG56 351 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 RHOT2Q8IXI1 618 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 STKLD1Q8NE28 680 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SAV1Q9H4B6 383 aaPredicted RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TAF1DQ9H5J8 278 aaPredicted RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TMEM161AQ9NX61 479 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ZSCAN32Q9NX65 697 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF180Q9UJW8 692 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF233A6NK53 670 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SNAP23O00161 211 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 NMT2O60551 498 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ASS1P00966 412 aaKnown RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF806P0C7X5 589 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ZSCAN20P17040 1043 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms