RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 DDR1Q08345 913 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 DHX34Q14147 1143 aaKnown RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 ACBD5Q5T8D3 534 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 PDZD8Q8NEN9 1154 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 PIP4K2CQ8TBX8 421 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 PSPC1Q8WXF1 523 aaKnown RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 VPS11Q9H270 941 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 IPO11Q9UI26 975 aaKnown RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 ITSN1Q15811 1721 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 RSPH10B2B2RC85 870 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 HSPA4LO95757 839 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 RSPH10BP0C881 870 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 PSEN1P49768 467 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 CCNHP51946 323 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 FAM102AQ5T9C2 384 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 AGBL2Q5U5Z8 902 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 TXNRD3Q86VQ6 643 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 METTL23Q86XA0 190 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 C9orf72Q96LT7 481 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 TMEM117Q9H0C3 514 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 KLHL8Q9P2G9 620 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 CAPN6Q9Y6Q1 641 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 RFX1P22670 979 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 MMP14P50281 582 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 STX1BP61266 288 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 CAV1Q03135 178 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 DSTYKQ6XUX3 929 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 SPATA21Q7Z572 469 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 ARHGAP22Q7Z5H3 698 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 EGFL6Q8IUX8 553 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 PARD3BQ8TEW8 1205 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 LRRC37BQ96QE4 947 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 PI4K2AQ9BTU6 479 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 HOXC10Q9NYD6 342 aa8.54□□□□□ -1.04
UBE4B-202ENST00000343090 USP15Q9Y4E8 981 aaPredicted RBP8.54□□□□□ -1.04
UBE4B-202ENST00000343090 A0A1W2PQJ5 194 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 TBXAS1P24557 533 aaPredicted RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ADORA2BP29275 332 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 FXR2P51116 673 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■■■□□ 17.2
UBE4B-202ENST00000343090 GRAMD1BQ3KR37 738 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 KLHDC7AQ5VTJ3 777 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 C3orf20Q8ND61 904 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ATP6V1E2Q96A05 226 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ZMAT2Q96NC0 199 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 OLFM3Q96PB7 478 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 PACSIN1Q9BY11 444 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 LACRTQ9GZZ8 138 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 PIM2Q9P1W9 311 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 PFASO15067 1338 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 NVLO15381 856 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 IREB2P48200 963 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 PMS1P54277 932 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 HERVK_113P62684 666 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 NOP14P78316 857 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ART3Q13508 389 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 SNRNP35Q16560 246 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 OLFML2BQ68BL8 750 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 USP38Q8NB14 1042 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 FAM210AQ96ND0 272 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ERGIC2Q96RQ1 377 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 TRAIPQ9BWF2 469 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 KDM4CQ9H3R0 1056 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 PAIP2BQ9ULR5 123 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ARL2BPQ9Y2Y0 163 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 A0A087X0T9 212 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 A0A0U1RQJ8 604 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 LPXNO60711 386 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 PHF2O75151 1096 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ZBTB7AO95365 584 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 FAM228BP0C875 321 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 MX2P20592 715 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 COMTP21964 271 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 BAATQ14032 418 aaPredicted RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 COL9A3Q14050 684 aaPredicted RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 TFDP2Q14188 446 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 SEC23AQ15436 765 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 PKN1Q16512 942 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 P3H1Q32P28 736 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 MSL3Q8N5Y2 521 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ANKS1AQ92625 1134 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 KIFC3Q9BVG8 833 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 FRMPD1Q5SYB0 1578 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 MYO3BQ8WXR4 1341 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 CFAP69A5D8W1 941 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 HAUS5O94927 633 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 SDC4P31431 198 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ZBTB17Q13105 803 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 ARMCX2Q7L311 632 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 NAF1Q96HR8 494 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 TTC25Q96NG3 672 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 RUSC1Q9BVN2 902 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 SEMA6BQ9H3T3 888 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 HERC5Q9UII4 1024 aaKnown RBP8.53□□□□□ -1.04
UBE4B-202ENST00000343090 STRIP2Q9ULQ0 834 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 SPATA31A1Q5TZJ5 1347 aa8.53□□□□□ -1.04
UBE4B-202ENST00000343090 TTC36A6NLP5 189 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 SPECC1L-ADORA2AF8WAN1 911 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms