RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 CREB3O43889 395 aa12.47□□□□□ -0.41
TRAK1-202ENST00000341421 BAG6P46379 1132 aa12.47□□□□□ -0.41
TRAK1-202ENST00000341421 PAPOLAP51003 745 aaKnown RBP12.47□□□□□ -0.41
TRAK1-202ENST00000341421 RAD23BP54727 409 aa12.47□□□□□ -0.41
TRAK1-202ENST00000341421 KRT17Q04695 432 aa12.47□□□□□ -0.41
TRAK1-202ENST00000341421 PPP2R5CQ13362 524 aa12.47□□□□□ -0.41
TRAK1-202ENST00000341421 ZSWIM1Q9BR11 485 aa12.47□□□□□ -0.41
TRAK1-202ENST00000341421 GANQ9H2C0 597 aa12.47□□□□□ -0.41
TRAK1-202ENST00000341421 PABPC3Q9H361 631 aaKnown RBP12.47□□□□□ -0.41
TRAK1-202ENST00000341421 PAPOLBQ9NRJ5 636 aaKnown RBP12.47□□□□□ -0.41
TRAK1-202ENST00000341421 ZSCAN5CA6NGD5 496 aaPredicted RBP12.46□□□□□ -0.41
TRAK1-202ENST00000341421 IGF2BP3O00425 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAK1-202ENST00000341421 GABPAQ06546 454 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 PCGF5Q86SE9 256 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
TRAK1-202ENST00000341421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAK1-202ENST00000341421 FAM167AQ96KS9 214 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 C11orf70Q9BRQ4 267 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 CELF4Q9BZC1 486 aaKnown RBP12.46□□□□□ -0.41
TRAK1-202ENST00000341421 KCNQ5Q9NR82 932 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 GINM1Q9NU53 330 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 STRIP2Q9ULQ0 834 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 FAM86B1E9PN63 330 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 FOXN3O00409 490 aaPredicted RBP12.46□□□□□ -0.41
TRAK1-202ENST00000341421 ATP5HO75947 161 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 FAM86B2P0C5J1 330 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 C11orf63Q6NUN7 778 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 CTAGE3PQ8IX95 158 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 ANKRD27Q96NW4 1050 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 ADPGKQ9BRR6 497 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 IFT122Q9HBG6 1241 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 USP15Q9Y4E8 981 aaPredicted RBP12.46□□□□□ -0.41
TRAK1-202ENST00000341421 FRMPD4Q14CM0 1322 aa12.46□□□□□ -0.41
TRAK1-202ENST00000341421 MCF2LO15068 1137 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 SORBS3O60504 671 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 ICAM1P05362 532 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 KLC1Q07866 573 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 STXBP2Q15833 593 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 TMEM270Q6UE05 265 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 ERICH1Q86X53 443 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 GLIS3Q8NEA6 775 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 MDM1Q8TC05 714 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 TRAIPQ9BWF2 469 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 KCTD10Q9H3F6 313 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 ETNK1Q9HBU6 452 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 TBK1Q9UHD2 729 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 PCDHB2Q9Y5E7 798 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 SIPA1L3O60292 1781 aaPredicted RBP12.46□□□□□ -0.42
TRAK1-202ENST00000341421 AP1G2O75843 785 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 GNA15P30679 374 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 TAP1Q03518 808 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 MAP7Q14244 749 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 SPARCL1Q14515 664 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 STAT4Q14765 748 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 CAPN12Q6ZSI9 719 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 BZW1Q7L1Q6 419 aaKnown RBP12.46□□□□□ -0.42
TRAK1-202ENST00000341421 ATP2A3Q93084 1043 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 GRAMD1AQ96CP6 724 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 CCDC97Q96F63 343 aaPredicted RBP12.46□□□□□ -0.42
TRAK1-202ENST00000341421 FBXO40Q9UH90 709 aa12.46□□□□□ -0.42
TRAK1-202ENST00000341421 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.42
TRAK1-202ENST00000341421 CLDN3O15551 220 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 NPM3O75607 178 aaKnown RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 PTENP60484 403 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 TFAMQ00059 246 aaKnown RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 BMT2Q1RMZ1 405 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 SNRNP48Q6IEG0 339 aaKnown RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 PHLDB3Q6NSJ2 640 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 OTOP1Q7RTM1 612 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 DTNBP1Q96EV8 351 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 POLR3FQ9H1D9 316 aaPredicted RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 AGO2Q9UKV8 859 aaKnown RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 TLR3O15455 904 aaKnown RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 INHBAP08476 426 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 BRAFP15056 766 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 SPDYCQ5MJ68 293 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 RFX6Q8HWS3 928 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 TRIM42Q8IWZ5 723 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 PDIK1LQ8N165 341 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 TEKT4Q8WW24 435 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 HOXC10Q9NYD6 342 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 HESX1Q9UBX0 185 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 LMNAP02545 664 aaKnown RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 ARL1P40616 181 aaPredicted RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 MSH2P43246 934 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 LACTB2Q53H82 288 aaPredicted RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 SEPT14Q6ZU15 432 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 SLC13A5Q86YT5 568 aaPredicted RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 PRMT1Q99873 361 aaKnown RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 HEMGNQ9BXL5 484 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 SUDS3Q9H7L9 328 aaPredicted RBP12.45□□□□□ -0.42
TRAK1-202ENST00000341421 PARVAQ9NVD7 372 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 STOML1Q9UBI4 398 aa12.45□□□□□ -0.42
TRAK1-202ENST00000341421 DBR1Q9UK59 544 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms