RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 YWHABP31946 246 aaKnown RBP15.38■□□□□ 0.05
CPSF7-201ENST00000340437 ELF1P32519 619 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 DACT2Q5SW24 774 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 SPOPLQ6IQ16 392 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 COL23A1Q86Y22 540 aaPredicted RBP15.38■□□□□ 0.05
CPSF7-201ENST00000340437 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
CPSF7-201ENST00000340437 HERPUD2Q9BSE4 406 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 PPIP5K2O43314 1243 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 C21orf2O43822 256 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 TNNI1P19237 187 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 TMEM39BQ9GZU3 492 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 NKIRAS1Q9NYS0 192 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 COL20A1Q9P218 1284 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 GGA2Q9UJY4 613 aa15.38■□□□□ 0.05
CPSF7-201ENST00000340437 ARFGEF1Q9Y6D6 1849 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 GOLGA8SH3BPF8 625 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 GOLGA8MH3BSY2 632 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 IFNB1P01574 187 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 P4HBP07237 508 aaKnown RBP15.37■□□□□ 0.05
CPSF7-201ENST00000340437 CTNNA2P26232 953 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 RARRES1P49788 294 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 C1orf220Q5T0J3 134 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 C11orf63Q6NUN7 778 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 GJD4Q96KN9 370 aaPredicted RBP15.37■□□□□ 0.05
CPSF7-201ENST00000340437 MXRA8Q9BRK3 442 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 PCYOX1Q9UHG3 505 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 HNRNPDLO14979 420 aaKnown RBP15.37■□□□□ 0.05
CPSF7-201ENST00000340437 RALAP11233 206 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 USP15Q9Y4E8 981 aaPredicted RBP15.37■□□□□ 0.05
CPSF7-201ENST00000340437 WDR91A4D1P6 747 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 SLC26A4O43511 780 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 SUN1O94901 812 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 PLS3P13797 630 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 HSPA6P17066 643 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 CNGA1P29973 690 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 QARSP47897 775 aaKnown RBP15.37■□□□□ 0.05
CPSF7-201ENST00000340437 PREPLQ4J6C6 727 aaPredicted RBP15.37■□□□□ 0.05
CPSF7-201ENST00000340437 KIFAP3Q92845 792 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 RUNDC3BQ96NL0 473 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 PLVAPQ9BX97 442 aa15.37■□□□□ 0.05
CPSF7-201ENST00000340437 BHMG1C9JSJ3 638 aaPredicted RBP15.36■□□□□ 0.05
CPSF7-201ENST00000340437 MTMR1Q13613 665 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 MPP2Q14168 576 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 ATP13A4Q4VNC1 1196 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 STRIP1Q5VSL9 837 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 KRT39Q6A163 491 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 SLC17A8Q8NDX2 589 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 ART4Q93070 314 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 PCDHA3Q9Y5H8 950 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 SNX3O60493 162 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 GAS8O95995 478 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
CPSF7-201ENST00000340437 KRT10P13645 584 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 ZNF131P52739 623 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 SEZ6Q53EL9 994 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 WDR78Q5VTH9 848 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 CYFIP1Q7L576 1253 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 FMNL3Q8IVF7 1028 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 C3orf20Q8ND61 904 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 SPIRE2Q8WWL2 714 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 RPS6KC1Q96S38 1066 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 IDI2Q9BXS1 227 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 KMT5AQ9NQR1 393 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 NOCTQ9UK39 431 aaKnown RBP15.36■□□□□ 0.05
CPSF7-201ENST00000340437 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 ATP9AO75110 1047 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 ZSCAN5DPP0CG00 497 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 KRT15P19012 456 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 XRCC4Q13426 336 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 SLC15A2Q16348 729 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 C4orf33Q8N1A6 199 aa15.36■□□□□ 0.05
CPSF7-201ENST00000340437 RASA4BC9J798 803 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 RASA4O43374 803 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ALDH5A1P51649 535 aaPredicted RBP15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ZNF394Q53GI3 561 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ZNF449Q6P9G9 518 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 NSMCE1Q8WV22 266 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 SPOCK2Q92563 424 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 VPS37BQ9H9H4 285 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 RAB20Q9NX57 234 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 SRRM3A6NNA2 597 aaPredicted RBP15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ASAP2O43150 1006 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 DIAPH2O60879 1101 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 PSMC4P43686 418 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ACOT2P49753 483 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 PIGWQ7Z7B1 504 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 VSIG1Q86XK7 387 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 FAM71AQ8IYT1 594 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 FBXL13Q8NEE6 735 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 TAAR1Q96RJ0 339 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ZNF341Q9BYN7 854 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 CFHP08603 1231 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 CETPP11597 493 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ETS1P14921 441 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 SLC8A1P32418 973 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 HSPA1LP34931 641 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 NSFP46459 744 aaKnown RBP15.35■□□□□ 0.05
CPSF7-201ENST00000340437 LACTB2Q53H82 288 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms