RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 KRI1Q8N9T8 703 aaKnown RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 UROC1Q96N76 676 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 ZNF396Q96N95 335 aaPredicted RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 REEP2Q9BRK0 252 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 PHF7Q9BWX1 381 aaPredicted RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 CDT1Q9H211 546 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 S1PR5Q9H228 398 aa14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.62□□□□□ -0.07
SIRPB3P-201ENST00000340424 SFI1A8K8P3 1242 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 PTGESO14684 152 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 TBCAO75347 108 aaKnown RBP14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 TADA2AO75478 443 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 FAM13AO94988 1023 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 ADH1AP07327 375 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 RBM10P98175 930 aaKnown RBP14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 CBX2Q14781 532 aaPredicted RBP14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 NOLC1Q14978 699 aaKnown RBP eCLIP14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 USP41Q3LFD5 358 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 KIAA1841Q6NSI8 718 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 FUT10Q6P4F1 479 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 SYCE2Q6PIF2 218 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 CCDC73Q6ZRK6 1079 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 SLC22A17Q8WUG5 538 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 AUTS2Q8WXX7 1259 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 TARS2Q9BW92 718 aaKnown RBP14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 ADAM7Q9H2U9 754 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 RXFP1Q9HBX9 757 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 CHST7Q9NS84 486 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 SLC38A7Q9NVC3 462 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 USP20Q9Y2K6 914 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 GDAQ9Y2T3 454 aa14.61□□□□□ -0.07
SIRPB3P-201ENST00000340424 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 TMEM189-UBE2V1I3L0A0 370 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 CLDN3O15551 220 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 CNPP09543 421 aaKnown RBP14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 KLRC2P26717 231 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 CLCN4P51793 760 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 MCM6Q14566 821 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 NAB2Q15742 525 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 KYAT1Q16773 422 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 XKR4Q5GH76 650 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 KIAA0319Q5VV43 1072 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 RRAGBQ5VZM2 374 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 PDXDC1Q6P996 788 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 MYCT1Q8N699 235 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 EPSTI1Q96J88 318 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 RIPOR3Q96MK2 946 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 ACAP3Q96P50 834 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 KLHL5Q96PQ7 755 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 PPP1R10Q96QC0 940 aaKnown RBP14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 USP28Q96RU2 1077 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 CD320Q9NPF0 282 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 FNIP2Q9P278 1114 aa14.6□□□□□ -0.07
SIRPB3P-201ENST00000340424 MYH15Q9Y2K3 1946 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 NPHP3-ACAD11A0A0J9YXS1 232 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 CASTOR2A6NHX0 329 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 ABLIM1O14639 778 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 TRAK2O60296 914 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 PPP6R2O75170 966 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 YEATS4O95619 227 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 KCNE1P15382 129 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 MTHFRP42898 656 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 CEBPZQ03701 1054 aaKnown RBP14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 MCL1Q07820 350 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 DHX8Q14562 1220 aaKnown RBP14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 STK38Q15208 465 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 ATL3Q6DD88 541 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 ALKAL1Q6UXT8 129 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 HAUS6Q7Z4H7 955 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 HDAC7Q8WUI4 952 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 BICD1Q96G01 975 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 DDX27Q96GQ7 796 aaKnown RBP14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 ST6GALNAC4Q9H4F1 302 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 SFXN1Q9H9B4 322 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 SEL1LQ9UBV2 794 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 NR2E1Q9Y466 385 aa14.59□□□□□ -0.07
SIRPB3P-201ENST00000340424 SMIM28A0A1B0GU29 152 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 LOC730098B7Z3J9 87 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 K7ENM7 598 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 HNRNPDLO14979 420 aaKnown RBP14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 DCXO43602 365 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 TRAPPC3O43617 180 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 PIGRP01833 764 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 ZSCAN22P10073 491 aaPredicted RBP14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 EPCAMP16422 314 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 ANP32AP39687 249 aaKnown RBP14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 LIG4P49917 911 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 CYP26C1Q6V0L0 522 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 SV2BQ7L1I2 683 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 ZBTB33Q86T24 672 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 LINC00301Q8NCQ3 95 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 LRRC15Q8TF66 581 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 HVCN1Q96D96 273 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 SNX27Q96L92 541 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 FBXL18Q96ME1 805 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 TSPAN18Q96SJ8 248 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms