RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 TBX20Q9UMR3 447 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 USP15Q9Y4E8 981 aaPredicted RBP16■□□□□ 0.15
ERCC1-203ENST00000340192 MYMKA6NI61 221 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 CLDN3O15551 220 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 TADA2AO75478 443 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 KIF4AO95239 1232 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 CNPP09543 421 aaKnown RBP15.99■□□□□ 0.15
ERCC1-203ENST00000340192 EPCAMP16422 314 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 SCP2P22307 547 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 NMT1P30419 496 aaKnown RBP15.99■□□□□ 0.15
ERCC1-203ENST00000340192 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
ERCC1-203ENST00000340192 GLUD2P49448 558 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 ZP2Q05996 745 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 KIAA0319Q5VV43 1072 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 FUT10Q6P4F1 479 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 SYCE2Q6PIF2 218 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 ALKAL1Q6UXT8 129 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 ADHFE1Q8IWW8 467 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 GJD3Q8N144 294 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 PDILTQ8N807 584 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 HASPINQ8TF76 798 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 DDX12PQ92771 950 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 B3GALT6Q96L58 329 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 ACAP3Q96P50 834 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 KLHL5Q96PQ7 755 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 FIZ1Q96SL8 496 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 APOL5Q9BWW9 433 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 EMILIN2Q9BXX0 1053 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 HAPLN2Q9GZV7 340 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 S1PR5Q9H228 398 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 SSX2IPQ9Y2D8 614 aa15.99■□□□□ 0.15
ERCC1-203ENST00000340192 SF3B1O75533 1304 aaKnown RBP eCLIP15.98■□□□□ 0.15
ERCC1-203ENST00000340192 SMIM28A0A1B0GU29 152 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 HNRNPDLO14979 420 aaKnown RBP15.98■□□□□ 0.15
ERCC1-203ENST00000340192 CUTAO60888 179 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 HOXB8P17481 243 aaPredicted RBP15.98■□□□□ 0.15
ERCC1-203ENST00000340192 KLRC2P26717 231 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 MATR3P43243 847 aaKnown RBP eCLIP15.98■□□□□ 0.15
ERCC1-203ENST00000340192 LIG4P49917 911 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 DSG1Q02413 1049 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 MCL1Q07820 350 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 SEZ6Q53EL9 994 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 XKR4Q5GH76 650 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 KIAA1841Q6NSI8 718 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 PPFIBP1Q86W92 1011 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 SLC22A17Q8WUG5 538 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 SNX27Q96L92 541 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 CHST7Q9NS84 486 aa15.98■□□□□ 0.15
ERCC1-203ENST00000340192 C19orf67A6NJJ6 358 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 MEFVO15553 781 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-203ENST00000340192 CLCN4P51793 760 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 GTF2BQ00403 316 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 USP41Q3LFD5 358 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 TPRNQ4KMQ1 711 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 ZC2HC1CQ53FD0 456 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-203ENST00000340192 ATL3Q6DD88 541 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 SFR1Q86XK3 245 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 KCNG4Q8TDN1 519 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 SUSD6Q92537 303 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 DNAJC19Q96DA6 116 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 ZMAT2Q96NC0 199 aaKnown RBP15.97■□□□□ 0.15
ERCC1-203ENST00000340192 POP1Q99575 1024 aaKnown RBP15.97■□□□□ 0.15
ERCC1-203ENST00000340192 GOLGA2P5Q9HBQ8 144 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 VWA8A3KMH1 1905 aa15.97■□□□□ 0.15
ERCC1-203ENST00000340192 TEX28O15482 410 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 PIGRP01833 764 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 KCNE1P15382 129 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 ABCD1P33897 745 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 CLCNKBP51801 687 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 DNM1Q05193 864 aaKnown RBP15.96■□□□□ 0.15
ERCC1-203ENST00000340192 SOX4Q06945 474 aaPredicted RBP15.96■□□□□ 0.15
ERCC1-203ENST00000340192 AXDND1Q5T1B0 1012 aaPredicted RBP15.96■□□□□ 0.15
ERCC1-203ENST00000340192 SHC4Q6S5L8 630 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 MAP4K3Q8IVH8 894 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 RIN2Q8WYP3 895 aaPredicted RBP15.96■□□□□ 0.15
ERCC1-203ENST00000340192 KHSRPQ92945 711 aaKnown RBP eCLIP15.96■□□□□ 0.15
ERCC1-203ENST00000340192 UROC1Q96N76 676 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 ST6GALNAC4Q9H4F1 302 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 RXFP1Q9HBX9 757 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 SLC38A7Q9NVC3 462 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 DZANK1Q9NVP4 752 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 SEL1LQ9UBV2 794 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 CFAP45Q9UL16 551 aa15.96■□□□□ 0.15
ERCC1-203ENST00000340192 MTCL1Q9Y4B5 1905 aaKnown RBP15.96■□□□□ 0.14
ERCC1-203ENST00000340192 TRIOO75962 3097 aa15.96■□□□□ 0.14
ERCC1-203ENST00000340192 TMEM189-UBE2V1I3L0A0 370 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 ADH1AP07327 375 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 GAP43P17677 238 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 IGFBP6P24592 240 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-203ENST00000340192 ME1P48163 572 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 ITIH3Q06033 890 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 CBX2Q14781 532 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-203ENST00000340192 E2F4Q16254 413 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 UPP1Q16831 310 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 SLC10A6Q3KNW5 377 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 FAM171A1Q5VUB5 890 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 KANK3Q6NY19 840 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 SLC39A4Q6P5W5 647 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 ZNF720Q7Z2F6 126 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms