RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 DEPTORQ8TB45 409 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 ATXN2LQ8WWM7 1075 aaKnown RBP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 CEP170P1Q96L14 293 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 POP1Q99575 1024 aaKnown RBP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 ERVK-5Q9HDB9 667 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 LRRIQ4A6NIV6 560 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 KRT16P08779 473 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 PGM1P36871 562 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 C1orf146Q5VVC0 180 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 LMBRD2Q68DH5 695 aaPredicted RBP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 SCYL2Q6P3W7 929 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 TMEM179Q6ZVK1 233 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 LRRC15Q8TF66 581 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 PAGR1Q9BTK6 254 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 SENP1Q9P0U3 644 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 GTF3C4Q9UKN8 822 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 BTNL10A8MVZ5 291 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 EIF3DO15371 548 aaKnown RBP eCLIP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 KCNA3P22001 575 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 SYDE1Q6ZW31 735 aaPredicted RBP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 EXOC3L1Q86VI1 746 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 CCDC22O60826 627 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 NCALDP61601 193 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 RBM41Q96IZ5 413 aaKnown RBP13.23□□□□□ -0.29
RIOK3-201ENST00000339486 FAM213AQ9BRX8 229 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 SMYD3Q9H7B4 428 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 TUFT1Q9NNX1 390 aa13.23□□□□□ -0.29
RIOK3-201ENST00000339486 IQANK1A0A1B0GTG1 560 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 RNF8O76064 485 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 GRIK5Q16478 980 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 BZW1Q7L1Q6 419 aaKnown RBP13.22□□□□□ -0.29
RIOK3-201ENST00000339486 LRRC57Q8N9N7 239 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 RTFDC1Q9BY42 306 aaPredicted RBP13.22□□□□□ -0.29
RIOK3-201ENST00000339486 DENND3A2RUS2 1198 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 COPEO14579 308 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 DKC1O60832 514 aaKnown RBP eCLIP13.22□□□□□ -0.29
RIOK3-201ENST00000339486 PFDN1O60925 122 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 TOM1L1O75674 476 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 CPA2P48052 419 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 PSMD6Q15008 389 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 RCN1Q15293 331 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 GRAMD1BQ3KR37 738 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 CEP55Q53EZ4 464 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 NLRP9Q7RTR0 991 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 PPP4R1Q8TF05 950 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
RIOK3-201ENST00000339486 ATP2A3Q93084 1043 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 WHRNQ9P202 907 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 SCINQ9Y6U3 715 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 A8MUI8 341 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 SPECC1L-ADORA2AF8WAN1 911 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 KIF3CO14782 793 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 LPXNO60711 386 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 GNAT1P11488 350 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 EPHB1P54762 984 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 KDSRQ06136 332 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 SPATA24Q86W54 205 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 SLC5A5Q92911 643 aa13.22□□□□□ -0.29
RIOK3-201ENST00000339486 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
RIOK3-201ENST00000339486 MGRN1O60291 552 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 EIF2AK2P19525 551 aaKnown RBP13.21□□□□□ -0.29
RIOK3-201ENST00000339486 SLC12A3P55017 1021 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 COG7P83436 770 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 MOV10L1Q9BXT6 1211 aaKnown RBP13.21□□□□□ -0.29
RIOK3-201ENST00000339486 NALCNQ8IZF0 1738 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 MCF2LO15068 1137 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 CBX6O95503 412 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 NDUFB10O96000 172 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
RIOK3-201ENST00000339486 SERPINB4P48594 390 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 PPP2R5DQ14738 602 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 HIF1AQ16665 826 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 LRRC36Q1X8D7 754 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
RIOK3-201ENST00000339486 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 ST13P4Q8IZP2 240 aaPredicted RBP13.21□□□□□ -0.29
RIOK3-201ENST00000339486 ATP11CQ8NB49 1132 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 CBWD1Q9BRT8 395 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
RIOK3-201ENST00000339486 METTL5Q9NRN9 209 aaKnown RBP13.21□□□□□ -0.29
RIOK3-201ENST00000339486 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 CAPN9O14815 690 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 PPIP5K2O43314 1243 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 UBTFL6P0CB48 400 aaPredicted RBP13.21□□□□□ -0.3
RIOK3-201ENST00000339486 TAL1P17542 331 aaPredicted RBP13.21□□□□□ -0.3
RIOK3-201ENST00000339486 EPHB2P29323 1055 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 ZCWPW2Q504Y3 356 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms