RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ZDHHC7Q9NXF8 308 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 FBXL21Q9UKT6 434 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 PLXNA3P51805 1871 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 KMT2EQ8IZD2 1858 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 C2orf16Q68DN1 1984 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 CASTOR2A6NHX0 329 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 CCDC169A6NNP5 214 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 ST18O60284 1047 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 RFPL2O75678 378 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 RECQL4O94761 1208 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 CLCN5P51795 746 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 YARSP54577 528 aaKnown RBP11.73□□□□□ -0.53
CAPN3-202ENST00000337571 TCF15Q12870 199 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 ATF7IP2Q5U623 682 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 ZNF318Q5VUA4 2279 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 C4orf32Q8N8J7 132 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 FLCNQ8NFG4 579 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 HASPINQ8TF76 798 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 NXPE3Q969Y0 559 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 TCHPQ9BT92 498 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 RHOBTB2Q9BYZ6 727 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 PRKD2Q9BZL6 878 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.73□□□□□ -0.53
CAPN3-202ENST00000337571 KCNG1Q9UIX4 513 aa11.73□□□□□ -0.53
CAPN3-202ENST00000337571 DENND4AQ7Z401 1863 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 CLUHO75153 1309 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 H0Y858 1186 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 RPL17P18621 184 aaKnown RBP11.72□□□□□ -0.53
CAPN3-202ENST00000337571 RFX1P22670 979 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 PEX3P56589 373 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 NBR1Q14596 966 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 ZRSR1Q15695 479 aaKnown RBP11.72□□□□□ -0.53
CAPN3-202ENST00000337571 ECM1Q16610 540 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 LIN9Q5TKA1 542 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 LILRA6Q6PI73 481 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 PRSS55Q6UWB4 352 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-202ENST00000337571 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 PAAF1Q9BRP4 392 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 KIFC3Q9BVG8 833 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 CCDC94Q9BW85 323 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-202ENST00000337571 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
CAPN3-202ENST00000337571 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 TOPORSQ9NS56 1045 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-202ENST00000337571 CACNG4Q9UBN1 327 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 USP20Q9Y2K6 914 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 RBM19Q9Y4C8 960 aaKnown RBP11.72□□□□□ -0.53
CAPN3-202ENST00000337571 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
CAPN3-202ENST00000337571 H3BQV1 296 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 PTGESO14684 152 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 ZMYND10O75800 440 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 B3GAT3O94766 335 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 KIF4AO95239 1232 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 PRPHP41219 470 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-202ENST00000337571 DMP1Q13316 513 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-202ENST00000337571 RABEP1Q15276 862 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 PSMD5Q16401 504 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 RTP2Q5QGT7 225 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 PPM1LQ5SGD2 360 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 NT5DC1Q5TFE4 455 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 EEF1DP3Q658K8 133 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 TMEM105Q8N8V8 129 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 FEZF2Q8TBJ5 459 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 PIK3R5Q8WYR1 880 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 CDK5RAP3Q96JB5 506 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 UROC1Q96N76 676 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 KIF2CQ99661 725 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 C17orf75Q9HAS0 396 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 POLIQ9UNA4 740 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 DUSP12Q9UNI6 340 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
CAPN3-202ENST00000337571 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-202ENST00000337571 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 E9PMD0 336 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 XYLBO75191 536 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 HNRNPA1P09651 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
CAPN3-202ENST00000337571 LAMP2P13473 410 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 FSHRP23945 695 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 NPTX2P47972 431 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 CLCNKBP51801 687 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 SMTNP53814 917 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 STRN3Q13033 797 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-202ENST00000337571 GET4Q7L5D6 327 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-202ENST00000337571 SIX5Q8N196 739 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 SLC44A3Q8N4M1 653 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-202ENST00000337571 ZNF707Q96C28 371 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-202ENST00000337571 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms