RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 POLR3FQ9H1D9 316 aaPredicted RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 QTRT2Q9H974 415 aaKnown RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 MAP3K20Q9NYL2 800 aaKnown RBP13.79□□□□□ -0.2
HLCS-201ENST00000336648 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 ZFATQ9P243 1243 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 ERVK-7P63135 1459 aa13.79□□□□□ -0.2
HLCS-201ENST00000336648 TRIM49BA6NDI0 452 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 ITIH2P19823 946 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 FAM102AQ5T9C2 384 aaPredicted RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 BTBD8Q5XKL5 378 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 SETD3Q86TU7 594 aaPredicted RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 ZBED2Q9BTP6 218 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 DDX47Q9H0S4 455 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 RANBP17Q9H2T7 1088 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 GID8Q9NWU2 228 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 SRGAP2O75044 1071 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 HSPA1AP0DMV8 641 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 HSPA1BP0DMV9 641 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 TCF3P15923 654 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 ANO4Q32M45 955 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 PDCD6IPQ8WUM4 868 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 SYTL2Q9HCH5 934 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 RNF146Q9NTX7 359 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 UTP6Q9NYH9 597 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 SSU72P8A0A1W2PR75 194 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 ASB14A6NK59 587 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 C16orf89Q6UX73 402 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 DDIASQ8IXT1 998 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 MOSPD1Q9UJG1 213 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 A0A087WWV3 80 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 PGM1P36871 562 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 SNRPFP62306 86 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 ATP2C1P98194 919 aaPredicted RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 SNRNP48Q6IEG0 339 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 STAG2Q8N3U4 1231 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 OR6P1Q8NGX9 317 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 KLHL31Q9H511 634 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 DHX35Q9H5Z1 703 aaKnown RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 ACAD9Q9H845 621 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 LY9Q9HBG7 655 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 KLC4Q9NSK0 619 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 TTC7AQ9ULT0 858 aaPredicted RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 MAGI2Q86UL8 1455 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 MROH7-TTC4A0A0A0MT08 1334 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 USP17L10C9JJH3 530 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 LTKP29376 864 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 SUSD4Q5VX71 490 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 CEP95Q96GE4 821 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 AIPL1Q9NZN9 384 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 FBXL5Q9UKA1 691 aa13.78□□□□□ -0.2
HLCS-201ENST00000336648 MORC2Q9Y6X9 1032 aaPredicted RBP13.78□□□□□ -0.2
HLCS-201ENST00000336648 A8MXQ7 604 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 CDH16O75309 829 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 PYGMP11217 842 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 CDH6P55285 790 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 TBC1D10CQ8IV04 446 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 NDFIP2Q9NV92 336 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 SELENONQ9NZV5 590 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.2
HLCS-201ENST00000336648 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.2
HLCS-201ENST00000336648 ITIH6Q6UXX5 1313 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 TTC26A0AVF1 554 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 KLHL2O95198 593 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 KRT17Q04695 432 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 DMC1Q14565 340 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 RIBC1Q8N443 379 aaPredicted RBP13.77□□□□□ -0.2
HLCS-201ENST00000336648 DCUN1D1Q96GG9 259 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 TMEM245Q9H330 911 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 DYRK4Q9NR20 520 aa13.77□□□□□ -0.2
HLCS-201ENST00000336648 CCDC195A0A1B0GUA6 201 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 C3orf70A6NLC5 250 aaPredicted RBP13.77□□□□□ -0.21
HLCS-201ENST00000336648 RASSF9O75901 435 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 HOXD10P28358 340 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 ARSEP51690 589 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 NCAPHQ15003 741 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
HLCS-201ENST00000336648 ABHD8Q96I13 439 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 TRABDQ9H4I3 376 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 DYTNA2CJ06 578 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 TRAPPC3O43617 180 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 AGBL2Q5U5Z8 902 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 PCYOX1LQ8NBM8 494 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 TNIP2Q8NFZ5 429 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
HLCS-201ENST00000336648 COQ7Q99807 217 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 ADNPQ9H2P0 1102 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 CCDC134Q9H6E4 229 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms