RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GOLGA8SH3BPF8 625 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 COPAP53621 1224 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 TSHZ1Q6ZSZ6 1077 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 COL23A1Q86Y22 540 aaPredicted RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SCUBE1Q8IWY4 988 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 DIS3LQ8TF46 1054 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CAVIN3Q969G5 261 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 IPPQ9Y573 584 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 AKAP10O43572 662 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 FTCDO95954 541 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ADSLP30566 484 aaPredicted RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 AP1S2P56377 157 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 JDP2Q8WYK2 163 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SLC13A1Q9BZW2 595 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 CYP26B1Q9NR63 512 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 RRN3Q9NYV6 651 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 MOSPD1Q9UJG1 213 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 CDK13Q14004 1512 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ABCA10Q8WWZ4 1543 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 E7EWF7 191 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 TK2O00142 265 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 BNIP3LO60238 219 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SPAG6O75602 509 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SLC34A1Q06495 639 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 CHMP1BQ7LBR1 199 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 RNF135Q8IUD6 432 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 APBB2Q92870 758 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 APOL6Q9BWW8 343 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SLC7A5P2Q9GIP4 190 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 NPHS2Q9NP85 383 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 TCOF1Q13428 1488 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 LRRIQ4A6NIV6 560 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 IDH3BO43837 385 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ATP9AO75110 1047 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ZBED4O75132 1171 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 POU5F1BQ06416 359 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 C16orf72Q14CZ0 275 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 OTUD7BQ6GQQ9 843 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 TTC8Q8TAM2 541 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 VPS39Q96JC1 886 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 DDX25Q9UHL0 483 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PCDHA12Q9UN75 941 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 CLCA2Q9UQC9 943 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PPIP5K1Q6PFW1 1433 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ABCC1P33527 1531 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PRPSAP2O60256 369 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 MFN2O95140 757 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ALBP02768 609 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 RWDD4Q6NW29 188 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 AGR3Q8TD06 166 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 NSFL1CQ9UNZ2 370 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 MEIS1O00470 390 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 WFS1O76024 890 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SKIV2L2P42285 1042 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 LRRC74AQ0VAA2 488 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 RBM20Q5T481 1227 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PRR23CQ6ZRP0 262 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 GATAD2AQ86YP4 633 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PM20D2Q8IYS1 436 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PHF20L1A8MW92 1017 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 TOM1O60784 492 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ZBED1O96006 694 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PDHBP11177 359 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 GYS1P13807 737 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 NT5C2P49902 561 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SNX17Q15036 470 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ARL6IP4Q66PJ3 421 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ZNF467Q7Z7K2 595 aaPredicted RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 MXD3Q9BW11 206 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 DDX20Q9UHI6 824 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SAGE2PA6NJ88 616 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ZNF12P17014 697 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PTGS2P35354 604 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 MXI1P50539 228 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 OR8H2Q8N162 312 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 GALNT4Q8N4A0 578 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 STK32AQ8WU08 396 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 KIFC1Q9BW19 673 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 SAYSD1Q9NPB0 183 aa10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 EXOSC4Q9NPD3 245 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 HERC5Q9UII4 1024 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 PDS5AQ29RF7 1337 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-201ENST00000333896 ZNF233A6NK53 670 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 SNPHO15079 494 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 LRPAP1P30533 357 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 ATP12AP54707 1039 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 SPDYCQ5MJ68 293 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 KRT74Q7RTS7 529 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 STK39Q9UEW8 545 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 PTPN4P29074 926 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 XIAPP98170 497 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 RBM12BQ8IXT5 1001 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 FAM149B1Q96BN6 582 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 GJA3Q9Y6H8 435 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 STXBP2Q15833 593 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
SPTBN1-201ENST00000333896 CENPPQ6IPU0 288 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms