RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 AP3M2P53677 418 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 GUCY1A3Q02108 690 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 ATF7IP2Q5U623 682 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 MORC4Q8TE76 937 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 EXT2Q93063 718 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 CBWD1Q9BRT8 395 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 DDX23Q9BUQ8 820 aaKnown RBP13.8□□□□□ -0.2
VSTM4-202ENST00000332853 PITPNM3Q9BZ71 974 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 WDR70Q9NW82 654 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 IGSF9BQ9UPX0 1349 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 TYW5A2RUC4 315 aaKnown RBP13.8□□□□□ -0.2
VSTM4-202ENST00000332853 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 Q4G0T1 1027 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 THAP2Q9H0W7 228 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 RGPD8O14715 1765 aaPredicted RBP13.8□□□□□ -0.2
VSTM4-202ENST00000332853 A0A087X0T9 212 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 A0A0G2JND7 137 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 FAM228BP0C875 321 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 CYP2B6P20813 491 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 CACNB2Q08289 660 aaPredicted RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 CBWD2Q8IUF1 395 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 EFCAB13Q8IY85 973 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 DDX56Q9NY93 547 aaKnown RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 TNPO2O14787 897 aaKnown RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 EXTL3O43909 919 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 TMEM132DQ14C87 1099 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 MYLK4Q86YV6 388 aaPredicted RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 PPM1NQ8N819 430 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 ANKRD7Q92527 254 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 ATP6V1G3Q96LB4 118 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 GPC4O75487 556 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 RPSAP08865 295 aaKnown RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 BCAR1P56945 870 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 NOP14P78316 857 aaKnown RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 ORC1Q13415 861 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 BZW1Q7L1Q6 419 aaKnown RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 SIK2Q9H0K1 926 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 FAM86B1E9PN63 330 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 SGPL1O95470 568 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 GH1P01241 217 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 BACE1P56817 501 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 HERVK_113P62684 666 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 DHX34Q14147 1143 aaKnown RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 CYP4A22Q5TCH4 519 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 C18orf8Q96DM3 657 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 INTUQ9ULD6 942 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
VSTM4-202ENST00000332853 GTF2H1P32780 548 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 SLC12A1Q13621 1099 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 UBA3Q8TBC4 463 aa13.79□□□□□ -0.2
VSTM4-202ENST00000332853 COPEO14579 308 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 PFDN6O15212 129 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
VSTM4-202ENST00000332853 TSPY1Q01534 308 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 MTM1Q13496 603 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CDKAL1Q5VV42 579 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CCNI2Q6ZMN8 369 aaPredicted RBP13.78□□□□□ -0.2
VSTM4-202ENST00000332853 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 SMTNL2Q2TAL5 461 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CHST13Q8NET6 341 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 SENP7Q9BQF6 1050 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 FOXN3O00409 490 aaPredicted RBP13.78□□□□□ -0.2
VSTM4-202ENST00000332853 RARBP10826 455 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CARSP49589 748 aaKnown RBP13.78□□□□□ -0.2
VSTM4-202ENST00000332853 SPARCL1Q14515 664 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 HEATR6Q6AI08 1181 aaKnown RBP13.78□□□□□ -0.2
VSTM4-202ENST00000332853 TRIM65Q6PJ69 517 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 TRIM42Q8IWZ5 723 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 LRRC4BQ9NT99 713 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 FAM49BQ9NUQ9 324 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CCL15-CCL14A0A0B4J2E2 113 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 TMEM150BA6NC51 233 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 PHF2O75151 1096 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 KCNJ1P48048 391 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 EIF3EP60228 445 aaKnown RBP13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CAV1Q03135 178 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 TAF1CQ15572 869 aaPredicted RBP13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CCL15Q16663 113 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 PXMP2Q9NR77 195 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 ALG6Q9Y672 507 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 ZBTB39O15060 712 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 BRAFP15056 766 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 POLIQ9UNA4 740 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 CAPN6Q9Y6Q1 641 aa13.78□□□□□ -0.2
VSTM4-202ENST00000332853 RFC5P40937 340 aa13.77□□□□□ -0.2
VSTM4-202ENST00000332853 SARSP49591 514 aaKnown RBP13.77□□□□□ -0.2
VSTM4-202ENST00000332853 PLCB4Q15147 1175 aa13.77□□□□□ -0.2
VSTM4-202ENST00000332853 P3H1Q32P28 736 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms