RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SP100P23497 879 aaPredicted RBP19.48■□□□□ 0.71
HDDC3-201ENST00000330334 SMTNP53814 917 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 MTMR3Q13615 1198 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 PDXDC1Q6P996 788 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 DCLRE1AQ6PJP8 1040 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 CCDC149Q6ZUS6 474 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 KREMEN2Q8NCW0 462 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 PIK3R5Q8WYR1 880 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 RABGGTAQ92696 567 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 ACSF2Q96CM8 615 aaPredicted RBP19.48■□□□□ 0.71
HDDC3-201ENST00000330334 CDK5RAP3Q96JB5 506 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 B3GALT6Q96L58 329 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 UROC1Q96N76 676 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 CXCL16Q9H2A7 254 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 ZDHHC7Q9NXF8 308 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 ZNF318Q5VUA4 2279 aa19.48■□□□□ 0.71
HDDC3-201ENST00000330334 CCDC195A0A1B0GUA6 201 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 TGM5O43548 720 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 SCP2P22307 547 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 YARSP54577 528 aaKnown RBP19.47■□□□□ 0.71
HDDC3-201ENST00000330334 ZRSR1Q15695 479 aaKnown RBP19.47■□□□□ 0.71
HDDC3-201ENST00000330334 RTP2Q5QGT7 225 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 ZBTB33Q86T24 672 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 FBXL6Q8N531 539 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 TMEM161BQ8NDZ6 487 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 LNX1Q8TBB1 728 aaPredicted RBP19.47■□□□□ 0.71
HDDC3-201ENST00000330334 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
HDDC3-201ENST00000330334 TARS2Q9BW92 718 aaKnown RBP19.47■□□□□ 0.71
HDDC3-201ENST00000330334 CDT1Q9H211 546 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 WDR6Q9NNW5 1121 aaKnown RBP19.47■□□□□ 0.71
HDDC3-201ENST00000330334 CACNG4Q9UBN1 327 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 PIEZO1Q92508 2521 aa19.47■□□□□ 0.71
HDDC3-201ENST00000330334 ZDBF2Q9HCK1 2354 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 SMIM28A0A1B0GU29 152 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 SFI1A8K8P3 1242 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 H0YCG3 227 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 ABLIM1O14639 778 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 SLC16A4O15374 487 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 LONP1P36776 959 aaKnown RBP19.46■□□□□ 0.71
HDDC3-201ENST00000330334 UBA7P41226 1012 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 UPP1Q16831 310 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 ZNF568Q3ZCX4 644 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 FAM171A1Q5VUB5 890 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 MPZL3Q6UWV2 235 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 ZPBP2Q6X784 338 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 PALB2Q86YC2 1186 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 DDX27Q96GQ7 796 aaKnown RBP19.46■□□□□ 0.71
HDDC3-201ENST00000330334 SLC38A7Q9NVC3 462 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 LARSQ9P2J5 1176 aaKnown RBP19.46■□□□□ 0.71
HDDC3-201ENST00000330334 LIMD1Q9UGP4 676 aa19.46■□□□□ 0.71
HDDC3-201ENST00000330334 TOM1L1O75674 476 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 B3GAT3O94766 335 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 MAPTP10636 758 aaKnown RBP19.45■□□□□ 0.7
HDDC3-201ENST00000330334 KCNE1P15382 129 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 STRN3Q13033 797 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 ARSHQ5FYA8 562 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.45■□□□□ 0.7
HDDC3-201ENST00000330334 SUGP1Q8IWZ8 645 aaKnown RBP19.45■□□□□ 0.7
HDDC3-201ENST00000330334 FEZF2Q8TBJ5 459 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 STAMQ92783 540 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 ZNF707Q96C28 371 aaPredicted RBP19.45■□□□□ 0.7
HDDC3-201ENST00000330334 CALML4Q96GE6 196 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 ACAP3Q96P50 834 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 PRRX2Q99811 253 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 CLSTN3Q9BQT9 956 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 TCHPQ9BT92 498 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 ODF2LQ9ULJ1 636 aa19.45■□□□□ 0.7
HDDC3-201ENST00000330334 TRAPPC3O43617 180 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 RFPL2O75678 378 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 FGFR3P22607 806 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 PRSS55Q6UWB4 352 aaPredicted RBP19.44■□□□□ 0.7
HDDC3-201ENST00000330334 RTL10Q7L3V2 364 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 CEP120Q8N960 986 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 HASPINQ8TF76 798 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 PLIN2Q99541 437 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 PRKD2Q9BZL6 878 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 MYO10Q9HD67 2058 aa19.44■□□□□ 0.7
HDDC3-201ENST00000330334 ZMYND10O75800 440 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 SPATA31D3P0C874 917 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 RPL17P18621 184 aaKnown RBP19.43■□□□□ 0.7
HDDC3-201ENST00000330334 HOXD11P31277 338 aaPredicted RBP19.43■□□□□ 0.7
HDDC3-201ENST00000330334 CLCNKBP51801 687 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 RAD51AP2Q09MP3 1159 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 SF3A1Q15459 793 aaKnown RBP19.43■□□□□ 0.7
HDDC3-201ENST00000330334 PSMD5Q16401 504 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 GLRA4Q5JXX5 417 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 CD300LGQ6UXG3 332 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 SPATA31D4Q6ZUB0 917 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 CEP57Q86XR8 500 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 SMG7Q92540 1137 aaKnown RBP19.43■□□□□ 0.7
HDDC3-201ENST00000330334 INTS4Q96HW7 963 aaKnown RBP19.43■□□□□ 0.7
HDDC3-201ENST00000330334 SNX27Q96L92 541 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 CNTN3Q9P232 1028 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 IGSF9Q9P2J2 1179 aa19.43■□□□□ 0.7
HDDC3-201ENST00000330334 ASGR2P07307 311 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 HOXA9P31269 272 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 RPL9P32969 192 aaKnown RBP19.42■□□□□ 0.7
HDDC3-201ENST00000330334 ZNF131P52739 623 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 NUBP1P53384 320 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 NCKAP1LP55160 1127 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms