RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 NR2E1Q9Y466 385 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 RBM47A0AV96 593 aaKnown RBP8.93□□□□□ -0.98
SKA2-201ENST00000330137 MYBL1P10243 752 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 KRT13P13646 458 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 EIF4BP23588 611 aaKnown RBP8.93□□□□□ -0.98
SKA2-201ENST00000330137 STAT1P42224 750 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 RASGRF1Q13972 1273 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 NONOQ15233 471 aaKnown RBP eCLIP8.93□□□□□ -0.98
SKA2-201ENST00000330137 EXOC3L4Q17RC7 722 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 GRK7Q8WTQ7 553 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 TEKT1Q969V4 418 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 FNBP1Q96RU3 617 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 PPP1R9AQ9ULJ8 1098 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 MTO1Q9Y2Z2 717 aaKnown RBP8.93□□□□□ -0.98
SKA2-201ENST00000330137 STK24Q9Y6E0 443 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 ZMYM2Q9UBW7 1377 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 SLC16A3O15427 465 aaKnown RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 SORBS3O60504 671 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 KRT36O76013 467 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 RFX1P22670 979 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 GNA11P29992 359 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 ADARP55265 1226 aaKnown RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 WDR4P57081 412 aaKnown RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 DCTN2Q13561 401 aaKnown RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 FAM26FQ5R3K3 315 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 DSTYKQ6XUX3 929 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 NEK8Q86SG6 692 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 MAML1Q92585 1016 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 UPF1Q92900 1129 aaKnown RBP eCLIP8.92□□□□□ -0.987e-8■■■□□ 15.2
SKA2-201ENST00000330137 C18orf8Q96DM3 657 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 SNF8Q96H20 258 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 CDK5RAP3Q96JB5 506 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 BTBD9Q96Q07 612 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 CRAMP1Q96RY5 1269 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 OSBPL8Q9BZF1 889 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 CNNM1Q9NRU3 951 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 ANKFY1Q9P2R3 1169 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 FETUBQ9UGM5 382 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 POLIQ9UNA4 740 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 NAALADL1Q9UQQ1 740 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 TRAF3IP3Q9Y228 551 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 ARHGAP10A1A4S6 786 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 HNRNPRO43390 633 aaKnown RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 PRKAB2O43741 272 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 HAUS5O94927 633 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 GH1P01241 217 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 ZNF24P17028 368 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 PON1P27169 355 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 ARID5AQ03989 594 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 CDK18Q07002 472 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 MED21Q13503 144 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 TBCCQ15814 346 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 HLFQ16534 295 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 HYIQ5T013 277 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 NCCRP1Q6ZVX7 275 aaPredicted RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 DGKHQ86XP1 1220 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 VPS52Q8N1B4 723 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 NUP93Q8N1F7 819 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 PROCA1Q8NCQ7 364 aaPredicted RBP8.92□□□□□ -0.98
SKA2-201ENST00000330137 ITPKCQ96DU7 683 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 MTMR9Q96QG7 549 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 SYT11Q9BT88 431 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 TRAIPQ9BWF2 469 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 KCTD10Q9H3F6 313 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 RMI1Q9H9A7 625 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 AAASQ9NRG9 546 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 BTBD7Q9P203 1132 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 COL18A1P39060 1754 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 EP400Q96L91 3159 aa8.92□□□□□ -0.98
SKA2-201ENST00000330137 TOGARAM1Q9Y4F4 1720 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 hCG_1642624A0A1W2PR95 340 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 hCG_1984214I3L0E3 225 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PEX1O43933 1283 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 EXOC3O60645 756 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 CBX6O95503 412 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 ANPEPP15144 967 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PORP16435 677 aaPredicted RBP8.91□□□□□ -0.98
SKA2-201ENST00000330137 RPL5P46777 297 aaKnown RBP8.91□□□□□ -0.98
SKA2-201ENST00000330137 SF3A3Q12874 501 aaKnown RBP eCLIP8.91□□□□□ -0.98
SKA2-201ENST00000330137 COASYQ13057 564 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PTK6Q13882 451 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 DDB1Q16531 1140 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 INF2Q27J81 1249 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 CFAP157Q5JU67 520 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 CCDC62Q6P9F0 684 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 ZNF449Q6P9G9 518 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 TSHZ1Q6ZSZ6 1077 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 SEPT14Q6ZU15 432 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 TRABD2AQ86V40 505 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 TMPRSS6Q8IU80 811 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 CCDC105Q8IYK2 499 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 ZBED8Q8IZ13 594 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 ZNF713Q8N859 430 aaPredicted RBP8.91□□□□□ -0.98
SKA2-201ENST00000330137 ZSWIM1Q9BR11 485 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 BRD8Q9H0E9 1235 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 GOLPH3Q9H4A6 298 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 FAIMQ9NVQ4 179 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 NDE1Q9NXR1 346 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 ESYT2A0FGR8 921 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms