RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
SYNGR1-203ENST00000328933 LRRC53A6NM62 1247 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 SGK1O00141 431 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 DUSP11O75319 330 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 DPYDQ12882 1025 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 ELAVL2Q12926 359 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 KCNA10Q16322 511 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 VPS37BQ9H9H4 285 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 NHEJ1Q9H9Q4 299 aaPredicted RBP15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 POLR3GO15318 223 aaPredicted RBP15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 EDRF1Q3B7T1 1238 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 CEP128Q6ZU80 1094 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 RSAD1Q9HA92 442 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 CKMP06732 381 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 GAD1Q99259 594 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 MTMR12Q9C0I1 747 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 RNPEPQ9H4A4 650 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 NAGPAQ9UK23 515 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 SH3BP1Q9Y3L3 701 aa15.35■□□□□ 0.05
SYNGR1-203ENST00000328933 PLA2G6O60733 806 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 SCP2P22307 547 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 KLRC2P26717 231 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 LBX1P52954 281 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 GAS2L3Q86XJ1 694 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 STKLD1Q8NE28 680 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 MAGOHBQ96A72 148 aaKnown RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 SLC28A3Q9HAS3 691 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 ASNSD1Q9NWL6 643 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 UBIAD1Q9Y5Z9 338 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 PHRF1Q9P1Y6 1649 aaKnown RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 C10orf71Q711Q0 1435 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 PFDN6O15212 129 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 CXCL8P10145 99 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 TADA2BQ86TJ2 420 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 RASAL3Q86YV0 1011 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 NIF3L1Q9GZT8 377 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 ANAPC5Q9UJX4 755 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 TIMM13Q9Y5L4 95 aaPredicted RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 SHPRHQ149N8 1683 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 CYB561D2O14569 222 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 IRF1P10914 325 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 TCP1P17987 556 aaKnown RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 NFKBIAP25963 317 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 GIT2Q14161 759 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 VSTM4Q8IW00 320 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 CD302Q8IX05 232 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 TNS4Q8IZW8 715 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 RBBP8NLQ8NC74 664 aaPredicted RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 NCAPGQ9BPX3 1015 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 DDX20Q9UHI6 824 aaKnown RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 H7C4K7 107 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 PIK3CDO00329 1044 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 FTCDO95954 541 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 CYP3A4P08684 503 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 ARHGAP15Q53QZ3 475 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 DARS2Q6PI48 645 aaKnown RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 PALM2Q8IXS6 379 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 ZNF784Q8NCA9 323 aaPredicted RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 ACRBPQ8NEB7 543 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 SELENOSQ9BQE4 189 aa15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 MRPL9Q9BYD2 267 aaKnown RBP15.34■□□□□ 0.05
SYNGR1-203ENST00000328933 SNX1Q13596 522 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 CCL14Q16627 93 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 ZNF280DQ6N043 979 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 OTOP2Q7RTS6 562 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 BHMTQ93088 406 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 TRIM62Q9BVG3 475 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 RNF19AQ9NV58 838 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 SLC4A7Q9Y6M7 1214 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 SLC16A3O15427 465 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 SAT1P21673 171 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 VEGFBP49765 207 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 PTPAQ15257 358 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 MAPRE1Q15691 268 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 HS1BP3Q53T59 392 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 FAM171A1Q5VUB5 890 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 ZNF410Q86VK4 478 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 LRRC8AQ8IWT6 810 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 EFCAB13Q8IY85 973 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 PARD3BQ8TEW8 1205 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 MRPS31Q92665 395 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 C18orf8Q96DM3 657 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 CYP4F11Q9HBI6 524 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 DBR1Q9UK59 544 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 CRCPO75575 148 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 ACO1P21399 889 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 FBXL16Q8N461 479 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 DPP7Q9UHL4 492 aa15.33■□□□□ 0.04
SYNGR1-203ENST00000328933 ENC1O14682 589 aa15.32■□□□□ 0.04
SYNGR1-203ENST00000328933 CD52P31358 61 aa15.32■□□□□ 0.04
SYNGR1-203ENST00000328933 TUBB4BP68371 445 aa15.32■□□□□ 0.04
SYNGR1-203ENST00000328933 STILQ15468 1287 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms