RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SPARCL1Q14515 664 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 RASIP1Q5U651 963 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 RNF19AQ9NV58 838 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 URB1O60287 2271 aaKnown RBP17.5■□□□□ 0.39
CLIP4-201ENST00000320081 GRID2IPA4D2P6 1211 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 APRTP07741 180 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 MYBL2P10244 700 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 SLC8A1P32418 973 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 SESN2P58004 480 aaPredicted RBP17.5■□□□□ 0.39
CLIP4-201ENST00000320081 ASPHQ12797 758 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
CLIP4-201ENST00000320081 AADACL2Q6P093 401 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 LRRC43Q8N309 656 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 RBBP8NLQ8NC74 664 aaPredicted RBP17.5■□□□□ 0.39
CLIP4-201ENST00000320081 NSMCE1Q8WV22 266 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 TLR10Q9BXR5 811 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 RIOX1Q9H6W3 641 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 CYP4F11Q9HBI6 524 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 PLEKHG2Q9H7P9 1386 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 BCL9O00512 1426 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 GPC4O75487 556 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 RALAP11233 206 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 VCX3BQ9H321 246 aa17.5■□□□□ 0.39
CLIP4-201ENST00000320081 MED7O43513 233 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 DPEP1P16444 411 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 CASP2P42575 452 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 GPC3P51654 580 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 BCAR1P56945 870 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 AMHR2Q16671 573 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 PPP1R13LQ8WUF5 828 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 DEPDC1BQ8WUY9 529 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 SNX9Q9Y5X1 595 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 DUOXA2Q1HG44 320 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 LRRC31Q6UY01 552 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 SLC47A2Q86VL8 602 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 SPATA24Q86W54 205 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 EPS8L3Q8TE67 593 aaKnown RBP17.49■□□□□ 0.39
CLIP4-201ENST00000320081 TSR3Q9UJK0 312 aaKnown RBP17.49■□□□□ 0.39
CLIP4-201ENST00000320081 RIC1Q4ADV7 1423 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 COPEO14579 308 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 GJB6O95452 261 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 TXNP10599 105 aaKnown RBP17.49■□□□□ 0.39
CLIP4-201ENST00000320081 KRT3P12035 628 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
CLIP4-201ENST00000320081 SFNP31947 248 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 ARL4CP56559 192 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 TSTA3Q13630 321 aaPredicted RBP17.49■□□□□ 0.39
CLIP4-201ENST00000320081 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 UBA3Q8TBC4 463 aa17.49■□□□□ 0.39
CLIP4-201ENST00000320081 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
CLIP4-201ENST00000320081 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
CLIP4-201ENST00000320081 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 MEFVO15553 781 aaPredicted RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 MMEL1Q495T6 779 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 RSBN1LQ6PCB5 846 aaPredicted RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 GSDMBQ8TAX9 411 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 SKA2Q8WVK7 121 aaPredicted RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 ERP44Q9BS26 406 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 TEX13BQ9BXU2 312 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 AGAP1Q9UPQ3 857 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 MOCS2O96007 188 aaPredicted RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 DGKZQ13574 1117 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 IL31Q6EBC2 164 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 TEX2Q8IWB9 1127 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 DAGLBQ8NCG7 672 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 FAM151AQ8WW52 585 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 OSBPL8Q9BZF1 889 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 USH1CQ9Y6N9 552 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 PRRC2BQ5JSZ5 2229 aaKnown RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 NOP14P78316 857 aaKnown RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 PPATQ06203 517 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 HDAC11Q96DB2 347 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 RBM41Q96IZ5 413 aaKnown RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 KLHL8Q9P2G9 620 aaPredicted RBP17.48■□□□□ 0.39
CLIP4-201ENST00000320081 MYO5BQ9ULV0 1848 aa17.48■□□□□ 0.39
CLIP4-201ENST00000320081 TRPA1O75762 1119 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 LCP1P13796 627 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 PHLDB3Q6NSJ2 640 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 WDR59Q6PJI9 974 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 DTX3LQ8TDB6 740 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 KIF12Q96FN5 646 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 SPC25Q9HBM1 224 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 ABCF3Q9NUQ8 709 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 PIAS1O75925 651 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 RARBP10826 455 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 RRM1P23921 792 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 SDC4P31431 198 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 GTF2H1P32780 548 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 DDR1Q08345 913 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 TRADDQ15628 312 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 GLRA4Q5JXX5 417 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 PPWD1Q96BP3 646 aaKnown RBP17.47■□□□□ 0.39
CLIP4-201ENST00000320081 IL17RAQ96F46 866 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms