RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 YEATS4O95619 227 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 BAG2O95816 211 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 VIL1P09327 827 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 HARSP12081 509 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 ZNF18P17022 549 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SOX11P35716 441 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PBX1P40424 430 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 USP14P54578 494 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SH3BP5LQ7L8J4 393 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 ZC3H18Q86VM9 953 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 SLC30A5Q8TAD4 765 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 TEKT4Q8WW24 435 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 VMP1Q96GC9 406 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ZSCAN10Q96SZ4 725 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 DNAJC5Q9H3Z4 198 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ADD3Q9UEY8 706 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 AGAP1Q9UPQ3 857 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 MTF2Q9Y483 593 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 C5orf42Q9H799 3197 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PSMA7O14818 248 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 KRT4P19013 534 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 VAV2P52735 878 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 TTC38Q5R3I4 469 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 CYP4X1Q8N118 509 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PHC3Q8NDX5 983 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ABHD10Q9NUJ1 306 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 COG5Q9UP83 839 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SPATA31A5Q5VU36 1347 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SPATA31A7Q8IWB4 1347 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SYNRGQ9UMZ2 1314 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 AKR1B10O60218 316 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 CMA1P23946 247 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 KRT83P78385 493 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PDE4DQ08499 809 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 FAAH2Q6GMR7 532 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ZNF444Q8N0Y2 327 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 TSPAN18Q96SJ8 248 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 LLPHQ9BRT6 129 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 DNAJC18Q9H819 358 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 NHEJ1Q9H9Q4 299 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 CTTNBP2NLQ9P2B4 639 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 GRIN2DO15399 1336 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 FLOT1O75955 427 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 RPS6KA3P51812 740 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 UAP1Q16222 522 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 TRAPPC3LQ5T215 181 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 DPH6Q7L8W6 267 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 RETREG2Q8NC44 543 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PARD3BQ8TEW8 1205 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.85□□□□□ -1.79
GEN1-201ENST00000317402 TMPRSS4Q9NRS4 437 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 HPCAL4Q9UM19 191 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 GMEB1Q9Y692 573 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 EFCAB8A8MWE9 144 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 RPN1P04843 607 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 RPS8P62241 208 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 FAPQ12884 760 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 TRIM14Q14142 442 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 C2CD5Q86YS7 1000 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ARHGEF19Q8IW93 802 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ZKSCAN4Q969J2 545 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 CLMNQ96JQ2 1002 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 TMEM47Q9BQJ4 181 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 BLOC1S4Q9NUP1 217 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 MYO1AQ9UBC5 1043 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 KIAA1671Q9BY89 1806 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 ARPC4-TTLL3A0A0A6YYG9 625 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 FAM86B1E9PN63 330 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 GH1P01241 217 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 FOSL2P15408 326 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PDE6CP51160 858 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 EHHADHQ08426 723 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TCP11X2Q5H9J9 407 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 DCAF12L1Q5VU92 463 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 VPS37AQ8NEZ2 397 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PSMA8Q8TAA3 256 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TBCKQ8TEA7 893 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 GLG1Q92896 1179 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 OPTNQ96CV9 577 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 OLFM3Q96PB7 478 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PAPOLBQ9NRJ5 636 aaKnown RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 HOMER3Q9NSC5 361 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TNS2Q63HR2 1409 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PHLPP1O60346 1717 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 KCPQ6ZWJ8 1503 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 ZNF804BA4D1E1 1349 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TLDC2A0PJX2 215 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PALMO75781 387 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 FGFR4P22455 802 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 CDK8P49336 464 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 ST13P50502 369 aaKnown RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 RINT1Q6NUQ1 792 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TMEM39BQ9GZU3 492 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 EPS8L2Q9H6S3 715 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 DISC1Q9NRI5 854 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TXNDC16Q9P2K2 825 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 CFAP54Q96N23 3096 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 F8P00451 2351 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 MYO3BQ8WXR4 1341 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms