RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 C6orf163Q5TEZ5 329 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 RBBP8NLQ8NC74 664 aaPredicted RBP14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 GDAP1Q8TB36 358 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 CCHCR1Q8TD31 782 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 FAM149B1Q96BN6 582 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 SMC6Q96SB8 1091 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 TMEM117Q9H0C3 514 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 R3HDM1Q15032 1099 aaKnown RBP14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 MMS22LQ6ZRQ5 1243 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 ZNF662Q6ZS27 426 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 SREK1Q8WXA9 508 aaKnown RBP14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 CFAP57Q96MR6 1250 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 IKZF4Q9H2S9 585 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 SAYSD1Q9NPB0 183 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 VAV3Q9UKW4 847 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 TJP1Q07157 1748 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 M0QZ92 97 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 ZNF263O14978 683 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 PPP1R37O75864 691 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 PHKA2P46019 1235 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 IRAK1P51617 712 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 MMP19Q99542 508 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 ERP44Q9BS26 406 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 NOD1Q9Y239 953 aa14.29□□□□□ -0.12
PCDHB9-201ENST00000316105 PI4K2BG5E9Z4 385 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 MAP2K7O14733 419 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 EXTL3O43909 919 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 NOP14P78316 857 aaKnown RBP14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 MYBPC2Q14324 1141 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 TTLL4Q14679 1199 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 SEZ6Q53EL9 994 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 RNF169Q8NCN4 708 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 HSPH1Q92598 858 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 ARL8AQ96BM9 186 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 EFCC1Q9HA90 598 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 IP6K2Q9UHH9 426 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 GTF3C4Q9UKN8 822 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 ITGB4P16144 1822 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 SUN1O94901 812 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 IL9RQ01113 521 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 BBS9Q3SYG4 887 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 C2CD6Q53TS8 623 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 FAM47CQ5HY64 1035 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 IL31RAQ8NI17 732 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 ACTRT1Q8TDG2 376 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 TTYH3Q9C0H2 523 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 NGRNQ9NPE2 291 aaKnown RBP14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 PCSK1NQ9UHG2 260 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 A0A0A6YYK5 440 aaPredicted RBP14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 GMNCA6NCL1 334 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 VWA5AO00534 786 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 OATP04181 439 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 ITGA4P13612 1032 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 ITGB5P18084 799 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 ZNF131P52739 623 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 MYO1EQ12965 1108 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 CCDC14Q49A88 953 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 DARS2Q6PI48 645 aaKnown RBP14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 NLRP14Q86W24 1093 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 LRRC71Q8N4P6 559 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 MED10Q9BTT4 135 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 PARVAQ9NVD7 372 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 MAD1L1Q9Y6D9 718 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 MYH13Q9UKX3 1938 aa14.28□□□□□ -0.12
PCDHB9-201ENST00000316105 A6NJR5 290 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 EIF3HO15372 352 aaKnown RBP eCLIP14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 TXNP10599 105 aaKnown RBP14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 CYP11B1P15538 503 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 HSD17B3P37058 310 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 PPP2R5DQ14738 602 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 Q3C1V9 767 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 ARHGEF18Q6ZSZ5 1173 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 SLC47A2Q86VL8 602 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 TRIM50Q86XT4 487 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 ZSWIM1Q9BR11 485 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 MLXIPLQ9NP71 852 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 PCDHGC5Q9Y5F6 944 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 ADAMTS7Q9UKP4 1686 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 PRPSAP2O60256 369 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 PSMC1P62191 440 aaKnown RBP14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 CCDC38Q502W7 563 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 HP1BP3Q5SSJ5 553 aaPredicted RBP14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 FOXR2Q6PJQ5 311 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 SV2AQ7L0J3 742 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 ARHGEF19Q8IW93 802 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 LRRC8CQ8TDW0 803 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 PNMA3Q9UL41 463 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 STK38LQ9Y2H1 464 aa14.27□□□□□ -0.12
PCDHB9-201ENST00000316105 CICQ96RK0 1608 aaPredicted RBP14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 YDJCA8MPS7 323 aa14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 CAPN9O14815 690 aa14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 SLC1A1P43005 524 aa14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 CDR2Q01850 454 aa14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 WDR72Q3MJ13 1102 aa14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 SNF8Q96H20 258 aa14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 FZD1Q9UP38 647 aa14.27□□□□□ -0.13
PCDHB9-201ENST00000316105 LAMA4Q16363 1823 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms