RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 DENND3A2RUS2 1198 aa16■□□□□ 0.15
CHFR-202ENST00000315585 ATP1A2P50993 1020 aa16■□□□□ 0.15
CHFR-202ENST00000315585 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
CHFR-202ENST00000315585 PDCLQ13371 301 aa16■□□□□ 0.15
CHFR-202ENST00000315585 C1orf220Q5T0J3 134 aa16■□□□□ 0.15
CHFR-202ENST00000315585 PPP1R2P3Q6NXS1 205 aa16■□□□□ 0.15
CHFR-202ENST00000315585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
CHFR-202ENST00000315585 DDX42Q86XP3 938 aaKnown RBP eCLIP16■□□□□ 0.15
CHFR-202ENST00000315585 CEP170P1Q96L14 293 aa16■□□□□ 0.15
CHFR-202ENST00000315585 CENPHQ9H3R5 247 aa16■□□□□ 0.15
CHFR-202ENST00000315585 CNOT10Q9H9A5 744 aaKnown RBP16■□□□□ 0.15
CHFR-202ENST00000315585 RAB20Q9NX57 234 aa16■□□□□ 0.15
CHFR-202ENST00000315585 GGA2Q9UJY4 613 aa16■□□□□ 0.15
CHFR-202ENST00000315585 NOCTQ9UK39 431 aaKnown RBP16■□□□□ 0.15
CHFR-202ENST00000315585 KIAA0754O94854 1291 aa16■□□□□ 0.15
CHFR-202ENST00000315585 CYP1A2P05177 515 aa16■□□□□ 0.15
CHFR-202ENST00000315585 GCNT1Q02742 428 aa16■□□□□ 0.15
CHFR-202ENST00000315585 ZNF844Q08AG5 666 aa16■□□□□ 0.15
CHFR-202ENST00000315585 SNAPC2Q13487 334 aa16■□□□□ 0.15
CHFR-202ENST00000315585 DCAF12L1Q5VU92 463 aa16■□□□□ 0.15
CHFR-202ENST00000315585 ZNF677Q86XU0 584 aa16■□□□□ 0.15
CHFR-202ENST00000315585 POMGNT1Q8WZA1 660 aa16■□□□□ 0.15
CHFR-202ENST00000315585 DHX38Q92620 1227 aaKnown RBP16■□□□□ 0.15
CHFR-202ENST00000315585 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
CHFR-202ENST00000315585 PNMA3Q9UL41 463 aa16■□□□□ 0.15
CHFR-202ENST00000315585 SPOPO43791 374 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 RGS20O76081 388 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CYP11B1P15538 503 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CTNNA2P26232 953 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 MAP2K1Q02750 393 aaPredicted RBP15.99■□□□□ 0.15
CHFR-202ENST00000315585 LDLRAD1Q5T700 205 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 GPD1LQ8N335 351 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 ZNF564Q8TBZ8 553 aaPredicted RBP15.99■□□□□ 0.15
CHFR-202ENST00000315585 MAGOHBQ96A72 148 aaKnown RBP15.99■□□□□ 0.15
CHFR-202ENST00000315585 SLC10A4Q96EP9 437 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CEP89Q96ST8 783 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 GABBR1Q9UBS5 961 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 LCMT1Q9UIC8 334 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CYP26A1O43174 497 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 SGPL1O95470 568 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 MYBL1P10243 752 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 COMTP21964 271 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 RWDD2BP57060 319 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 MESDQ14696 234 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 SLMAPQ14BN4 828 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 UAP1Q16222 522 aaPredicted RBP15.99■□□□□ 0.15
CHFR-202ENST00000315585 PALB2Q86YC2 1186 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 JAMLQ86YT9 394 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CBWD2Q8IUF1 395 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CCDC127Q96BQ5 260 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 CELF4Q9BZC1 486 aaKnown RBP15.99■□□□□ 0.15
CHFR-202ENST00000315585 STMN4Q9H169 189 aaPredicted RBP15.99■□□□□ 0.15
CHFR-202ENST00000315585 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 PCDHA3Q9Y5H8 950 aa15.99■□□□□ 0.15
CHFR-202ENST00000315585 MAN1A1P33908 653 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 FNTAP49354 379 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 UGCGQ16739 394 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 ACAD10Q6JQN1 1059 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 MOB2Q70IA6 237 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 NOP9Q86U38 636 aaKnown RBP15.98■□□□□ 0.15
CHFR-202ENST00000315585 ALG3Q92685 438 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 PABPC3Q9H361 631 aaKnown RBP15.98■□□□□ 0.15
CHFR-202ENST00000315585 GPRC5CQ9NQ84 441 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 TISP43B9A030 160 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 ADRB2P07550 413 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 NUDT17P0C025 328 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 POTEJP0CG39 1038 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 TGFB3P10600 412 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 ADSSP30520 456 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 ACTR2P61160 394 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 PPP2R2AP63151 447 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 CYP24A1Q07973 514 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 PTGISQ16647 500 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 WDR44Q5JSH3 913 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 ANO5Q75V66 913 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 CYFIP1Q7L576 1253 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 HELQQ8TDG4 1101 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 ZNF653Q96CK0 615 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 NUP85Q9BW27 656 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 MROH8Q9H579 483 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 ATP6V0A4Q9HBG4 840 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHFR-202ENST00000315585 FAM169AQ9Y6X4 670 aa15.98■□□□□ 0.15
CHFR-202ENST00000315585 LOC102724159A0A0B4J2E5 919 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 GOLGA8IPA6NC78 632 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 GOLGA8JA6NMD2 632 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 HNRNPDLO14979 420 aaKnown RBP15.97■□□□□ 0.15
CHFR-202ENST00000315585 FAM107AO95990 144 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 EDNRBP24530 442 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 SLC1A1P43005 524 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 PEX5P50542 639 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 FMO1Q01740 532 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 CNTN2Q02246 1040 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 BYSLQ13895 437 aaKnown RBP15.97■□□□□ 0.15
CHFR-202ENST00000315585 NEDD9Q14511 834 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 PWP2Q15269 919 aaKnown RBP15.97■□□□□ 0.15
CHFR-202ENST00000315585 CYP1B1Q16678 543 aa15.97■□□□□ 0.15
CHFR-202ENST00000315585 KRT71Q3SY84 523 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms