RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 PLCB2Q00722 1185 aa20.32■□□□□ 0.84
CDK4-202ENST00000312990 POU5F1Q01860 360 aaKnown RBP20.32■□□□□ 0.84
CDK4-202ENST00000312990 TCERG1LQ5VWI1 586 aa20.32■□□□□ 0.84
CDK4-202ENST00000312990 CNKSR3Q6P9H4 555 aa20.32■□□□□ 0.84
CDK4-202ENST00000312990 SLC24A5Q71RS6 500 aa20.32■□□□□ 0.84
CDK4-202ENST00000312990 MRPL10Q7Z7H8 261 aaKnown RBP20.32■□□□□ 0.84
CDK4-202ENST00000312990 ZNF598Q86UK7 904 aaKnown RBP20.32■□□□□ 0.84
CDK4-202ENST00000312990 TMC2Q8TDI7 906 aa20.32■□□□□ 0.84
CDK4-202ENST00000312990 POP1Q99575 1024 aaKnown RBP20.32■□□□□ 0.84
CDK4-202ENST00000312990 INTS13Q9NVM9 706 aa20.32■□□□□ 0.84
CDK4-202ENST00000312990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDK4-202ENST00000312990 A0A1B0GTH6 734 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.31■□□□□ 0.84
CDK4-202ENST00000312990 ENPP3O14638 875 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 DLATP10515 647 aaKnown RBP20.31■□□□□ 0.84
CDK4-202ENST00000312990 MRE11P49959 708 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 CLDN10P78369 228 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 ENPEPQ07075 957 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 FAM43BQ6ZT52 329 aaPredicted RBP20.31■□□□□ 0.84
CDK4-202ENST00000312990 ECHDC2Q86YB7 292 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 BADQ92934 168 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 LPPQ93052 612 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 FAM84AQ96KN4 292 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 SNX27Q96L92 541 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 TOPORSQ9NS56 1045 aaPredicted RBP20.31■□□□□ 0.84
CDK4-202ENST00000312990 IFNKQ9P0W0 207 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 PDE4DIPQ5VU43 2346 aa20.31■□□□□ 0.84
CDK4-202ENST00000312990 LACTBL1A8MY62 500 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 SYN1P17600 705 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 FAM189BP81408 668 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 PPP3CAQ08209 521 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 KCNH2Q12809 1159 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 VWA3BQ502W6 1294 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 LMBRD2Q68DH5 695 aaPredicted RBP20.3■□□□□ 0.84
CDK4-202ENST00000312990 ALKAL1Q6UXT8 129 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 FAM212AQ96EL1 285 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 NDST4Q9H3R1 872 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 C1orf112Q9NSG2 853 aa20.3■□□□□ 0.84
CDK4-202ENST00000312990 IL18RAPO95256 599 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 UBASH3AP57075 661 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 AGMOQ6ZNB7 445 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 EFCAB13Q8IY85 973 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 DPF3Q92784 378 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 FNBP1Q96RU3 617 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 XPO4Q9C0E2 1151 aaKnown RBP20.29■□□□□ 0.84
CDK4-202ENST00000312990 IL23AQ9NPF7 189 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 RTN4Q9NQC3 1192 aaKnown RBP20.29■□□□□ 0.84
CDK4-202ENST00000312990 PARP2Q9UGN5 583 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 ZMYND8Q9ULU4 1186 aaPredicted RBP20.29■□□□□ 0.84
CDK4-202ENST00000312990 LGALS16A8MUM7 142 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 TEX33O43247 280 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 PFKMP08237 780 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 ACRP10323 421 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 SKIP12755 728 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 ITGA4P13612 1032 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 YARSP54577 528 aaKnown RBP20.29■□□□□ 0.84
CDK4-202ENST00000312990 PPP2R3AQ06190 1150 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 XKR4Q5GH76 650 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 C16orf59Q7L2K0 433 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 ZNF516Q92618 1163 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 CGRRF1Q99675 332 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 ASB7Q9H672 318 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 PLEKHA5Q9HAU0 1116 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 KLK14Q9P0G3 267 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 CNTN3Q9P232 1028 aa20.29■□□□□ 0.84
CDK4-202ENST00000312990 TULP1O00294 542 aaPredicted RBP20.28■□□□□ 0.84
CDK4-202ENST00000312990 AFPP02771 609 aaKnown RBP20.28■□□□□ 0.84
CDK4-202ENST00000312990 NFICP08651 508 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 IBSPP21815 317 aaPredicted RBP20.28■□□□□ 0.84
CDK4-202ENST00000312990 IKBKEQ14164 716 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 NR1I3Q14994 352 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 SURF1Q15526 300 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 CBWD6Q4V339 395 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 CBWD3Q5JTY5 395 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 CBWD5Q5RIA9 395 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 JADE1Q6IE81 842 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 USP37Q86T82 979 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 HACE1Q8IYU2 909 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 RPUSD2Q8IZ73 545 aaKnown RBP20.28■□□□□ 0.84
CDK4-202ENST00000312990 CRIPAKQ8N1N5 446 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 RNF169Q8NCN4 708 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 OR5B17Q8NGF7 314 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 ZFP42Q96MM3 310 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 ZMAT2Q96NC0 199 aaKnown RBP20.28■□□□□ 0.84
CDK4-202ENST00000312990 TRIM5Q9C035 493 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 MMRN2Q9H8L6 949 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 RNF19AQ9NV58 838 aa20.28■□□□□ 0.84
CDK4-202ENST00000312990 PES1O00541 588 aaKnown RBP20.27■□□□□ 0.84
CDK4-202ENST00000312990 EOMESO95936 686 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 TNNI1P19237 187 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 GCLMP48507 274 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 FMO5P49326 533 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 AFF1P51825 1210 aaKnown RBP20.27■□□□□ 0.84
CDK4-202ENST00000312990 FPGSQ05932 587 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 PPIGQ13427 754 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDK4-202ENST00000312990 PTPN21Q16825 1174 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 WDR49Q8IV35 697 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 GSTCDQ8NEC7 633 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 TMEM117Q9H0C3 514 aa20.27■□□□□ 0.84
CDK4-202ENST00000312990 GIT1Q9Y2X7 761 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms