RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 KBTBD12Q3ZCT8 623 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 LRIG3Q6UXM1 1119 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 TAS2R42Q7RTR8 314 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 FRMD8Q9BZ67 464 aaPredicted RBP16.28■□□□□ 0.2
HCFC1-201ENST00000310441 FEM1BQ9UK73 627 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 E7ENQ6 273 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 MTSS1O43312 755 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 RCOR2Q8IZ40 523 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 FAM162AQ96A26 154 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 MAML3Q96JK9 1138 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 NDUFA13Q9P0J0 144 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 CC2D1AQ6P1N0 951 aaPredicted RBP16.28■□□□□ 0.2
HCFC1-201ENST00000310441 SPATA21Q7Z572 469 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 IMPAD1Q9NX62 359 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 NCAPD2Q15021 1401 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 PTPRTO14522 1441 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 DUOXA2Q1HG44 320 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 C16orf62Q7Z3J2 963 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 DDI1Q8WTU0 396 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 USP13Q92995 863 aaPredicted RBP16.28■□□□□ 0.2
HCFC1-201ENST00000310441 ALDH1A1P00352 501 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 MYL2P10916 166 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 VAMP7P51809 220 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
HCFC1-201ENST00000310441 TTLL4Q14679 1199 aa16.28■□□□□ 0.2
HCFC1-201ENST00000310441 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
HCFC1-201ENST00000310441 EVPLLA8MZ36 301 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 ATL2Q8NHH9 583 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 ZBED2Q9BTP6 218 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 BRD8Q9H0E9 1235 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 PDP2Q9P2J9 529 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 CHMP2BQ9UQN3 213 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 ADGRA3Q8IWK6 1321 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 CDK12Q9NYV4 1490 aaPredicted RBP16.27■□□□□ 0.2
HCFC1-201ENST00000310441 KCNA3P22001 575 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 PEX3P56589 373 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 FRMD5Q7Z6J6 570 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 DEPDC7Q96QD5 511 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
HCFC1-201ENST00000310441 KLHL31Q9H511 634 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 INPP5FQ9Y2H2 1132 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 SNAP25P60880 206 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 OSTNP61366 133 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.2
HCFC1-201ENST00000310441 FAM47DPA6NHR8 397 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 C3orf70A6NLC5 250 aaPredicted RBP16.27■□□□□ 0.19
HCFC1-201ENST00000310441 ARMCX4Q5H9R4 360 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 RIC8BQ9NVN3 520 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 WDR35Q9P2L0 1181 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 UBA6A0AVT1 1052 aaPredicted RBP16.27■□□□□ 0.19
HCFC1-201ENST00000310441 KCNH2Q12809 1159 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 MAPRE1Q15691 268 aaKnown RBP16.27■□□□□ 0.19
HCFC1-201ENST00000310441 UGT3A1Q6NUS8 523 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 CARD14Q9BXL6 1004 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 A0A1W2PQC6 194 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 STRNO43815 780 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 ARSEP51690 589 aa16.27■□□□□ 0.19
HCFC1-201ENST00000310441 ZBTB5O15062 677 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 ATXN3P54252 364 aaPredicted RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 HNRNPH2P55795 449 aaKnown RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 PIGHQ14442 188 aaPredicted RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 ZNF544Q6NX49 715 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 FANCEQ9HB96 536 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 USP21Q9UK80 565 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 USP15Q9Y4E8 981 aaPredicted RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 TRIM13O60858 407 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 ANGPT1Q15389 498 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 PGBD4Q96DM1 585 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 NFIBO00712 420 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 CYBBP04839 570 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 FDX1P10109 184 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 FAR2Q96K12 515 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 MED15Q96RN5 788 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 TET3O43151 1660 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 USP17L3A6NCW0 530 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 USP17L4A6NCW7 530 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 MEFVO15553 781 aaPredicted RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 RTN2O75298 545 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 FOXD4Q12950 439 aaPredicted RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 IYDQ6PHW0 289 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 USP17L1Q7RTZ2 530 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 SNX24Q9Y343 169 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 ADGRL2O95490 1459 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 DFFAO00273 331 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 APBA3O96018 575 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 KRT78Q8N1N4 520 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 HES6Q96HZ4 224 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 KANSL1LA0AUZ9 987 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 SAC3D1A6NKF1 404 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 XPO6Q96QU8 1125 aaKnown RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 M0QYV0 167 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 ACTR2P61160 394 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms