RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SPECC1Q5M775 1068 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 RTP2Q5QGT7 225 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 RARS2Q5T160 578 aaKnown RBP21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 PPFIBP1Q86W92 1011 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 RPGRIP1Q96KN7 1286 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 FBXL18Q96ME1 805 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 ZMAT2Q96NC0 199 aaKnown RBP21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 USP28Q96RU2 1077 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 EMILIN2Q9BXX0 1053 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 ODF2LQ9ULJ1 636 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 SRPRBQ9Y5M8 271 aaKnown RBP21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 DOCK8Q8NF50 2099 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 KIAA1841Q6NSI8 718 aa21.75■■□□□ 1.07
PDZRN3-202ENST00000308537 MPZL3Q6UWV2 235 aa21.75■■□□□ 1.07
PDZRN3-202ENST00000308537 GPBP1Q86WP2 473 aa21.75■■□□□ 1.07
PDZRN3-202ENST00000308537 C3orf58Q8NDZ4 430 aa21.75■■□□□ 1.07
PDZRN3-202ENST00000308537 HASPINQ8TF76 798 aa21.75■■□□□ 1.07
PDZRN3-202ENST00000308537 CALML4Q96GE6 196 aa21.75■■□□□ 1.07
PDZRN3-202ENST00000308537 CLIC6Q96NY7 704 aa21.75■■□□□ 1.07
PDZRN3-202ENST00000308537 SMIM28A0A1B0GU29 152 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 TMEM189-UBE2V1I3L0A0 370 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 STX6O43752 255 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 NR1I2O75469 434 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 MCF2P10911 925 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 KLRC2P26717 231 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 USP41Q3LFD5 358 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 LILRA6Q6PI73 481 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 SNX27Q96L92 541 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 GOLGA2P5Q9HBQ8 144 aa21.74■■□□□ 1.07
PDZRN3-202ENST00000308537 TOM1L1O75674 476 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 TMC5Q6UXY8 1006 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 ZPBP2Q6X784 338 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 GPR149Q86SP6 731 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 ZBTB33Q86T24 672 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 LARP4BQ92615 738 aaKnown RBP21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 NECTIN4Q96NY8 510 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 SFXN1Q9H9B4 322 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 FNIP2Q9P278 1114 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 SSX2IPQ9Y2D8 614 aa21.73■■□□□ 1.07
PDZRN3-202ENST00000308537 PRR33A8MZF0 331 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 C2CD4DB7Z1M9 353 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 FAM189A1O60320 539 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 C1RP00736 705 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 RPL17P18621 184 aaKnown RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 NASPP49321 788 aaPredicted RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 CLCNKBP51801 687 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 OSTNP61366 133 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 MCL1Q07820 350 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 DHX8Q14562 1220 aaKnown RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 SLC39A14Q15043 492 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 UPP1Q16831 310 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 CES5AQ6NT32 575 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 PRSS55Q6UWB4 352 aaPredicted RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 HAUS6Q7Z4H7 955 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 CMASQ8NFW8 434 aaPredicted RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 LNX1Q8TBB1 728 aaPredicted RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 RIN2Q8WYP3 895 aaPredicted RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 PIK3R5Q8WYR1 880 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 MAN1C1Q9NR34 630 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 CNTN3Q9P232 1028 aa21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 LARSQ9P2J5 1176 aaKnown RBP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 SF3B1O75533 1304 aaKnown RBP eCLIP21.72■■□□□ 1.07
PDZRN3-202ENST00000308537 ANK1P16157 1881 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 A0A087X0B3 334 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 TADA2AO75478 443 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 PIGRP01833 764 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 ADH1AP07327 375 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 KCNE1P15382 129 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 DDIT3P35638 169 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 MTHFRP42898 656 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 SMTNP53814 917 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 CEBPZQ03701 1054 aaKnown RBP21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 SLC10A6Q3KNW5 377 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 SEZ6Q53EL9 994 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 SLC39A4Q6P5W5 647 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 ZNF707Q96C28 371 aaPredicted RBP21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 CLSTN3Q9BQT9 956 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 CCDC94Q9BW85 323 aaPredicted RBP21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 RHOBTB2Q9BYZ6 727 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 KCNG1Q9UIX4 513 aa21.71■■□□□ 1.07
PDZRN3-202ENST00000308537 ADAM12O43184 909 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 TGM5O43548 720 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 GLUD1P00367 558 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 FGFR3P22607 806 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 SP100P23497 879 aaPredicted RBP21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 NOLC1Q14978 699 aaKnown RBP eCLIP21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 FAM171A1Q5VUB5 890 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 C15orf39Q6ZRI6 1047 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 APBB1IPQ7Z5R6 666 aaPredicted RBP21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 TMEM130Q8N3G9 435 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 TMEM87AQ8NBN3 555 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 EDAQ92838 391 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 RIPOR3Q96MK2 946 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 TTPALQ9BTX7 342 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 ZSCAN16Q9H4T2 348 aaPredicted RBP21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 PARVGQ9HBI0 331 aa21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.7■■□□□ 1.06
PDZRN3-202ENST00000308537 RFPL2O75678 378 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 STRN3Q13033 797 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 ATAT1Q5SQI0 421 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms