RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 NECTIN4Q96NY8 510 aa18.68■□□□□ 0.58
HMGCLL1-202ENST00000308161 SFXN1Q9H9B4 322 aa18.68■□□□□ 0.58
HMGCLL1-202ENST00000308161 MAN1C1Q9NR34 630 aa18.68■□□□□ 0.58
HMGCLL1-202ENST00000308161 TOPORSQ9NS56 1045 aaPredicted RBP18.68■□□□□ 0.58
HMGCLL1-202ENST00000308161 BLOC1S4Q9NUP1 217 aa18.68■□□□□ 0.58
HMGCLL1-202ENST00000308161 LARSQ9P2J5 1176 aaKnown RBP18.68■□□□□ 0.58
HMGCLL1-202ENST00000308161 MTMR6Q9Y217 621 aa18.68■□□□□ 0.58
HMGCLL1-202ENST00000308161 STX6O43752 255 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 GLUD1P00367 558 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 SPATA31D3P0C874 917 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 MAPTP10636 758 aaKnown RBP18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 RPL17P18621 184 aaKnown RBP18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 PTPAQ15257 358 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 SEZ6Q53EL9 994 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 HERC4Q5GLZ8 1057 aaPredicted RBP18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 PRSS55Q6UWB4 352 aaPredicted RBP18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 SPATA31D4Q6ZUB0 917 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 MYCT1Q8N699 235 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 CLIC6Q96NY7 704 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 GOLGA2P5Q9HBQ8 144 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 PTPRHQ9HD43 1115 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 CHST7Q9NS84 486 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 KCNG1Q9UIX4 513 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 MYH11P35749 1972 aa18.67■□□□□ 0.58
HMGCLL1-202ENST00000308161 K7ENM7 598 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 TBCAO75347 108 aaKnown RBP18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 EFEMP2O95967 443 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 MCF2P10911 925 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 NAB2Q15742 525 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 RTP2Q5QGT7 225 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 FOXD4L5Q5VV16 416 aaPredicted RBP18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 HSCBQ8IWL3 235 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 FOXD4L4Q8WXT5 416 aaPredicted RBP18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 LARP4BQ92615 738 aaKnown RBP18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 ACAP3Q96P50 834 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 NTPCRQ9BSD7 190 aaKnown RBP18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 RXFP1Q9HBX9 757 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 FBXO2Q9UK22 296 aaPredicted RBP18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 ODF2LQ9ULJ1 636 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 NR2E1Q9Y466 385 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 TRIOO75962 3097 aa18.66■□□□□ 0.58
HMGCLL1-202ENST00000308161 SMIM28A0A1B0GU29 152 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 C2CD4DB7Z1M9 353 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 B3GAT3O94766 335 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 PROZP22891 400 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 CLCNKBP51801 687 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 ELMSAN1Q6PJG2 1045 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 HAUS6Q7Z4H7 955 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 PPP1R10Q96QC0 940 aaKnown RBP18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 USP28Q96RU2 1077 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 TTPALQ9BTX7 342 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 PARVGQ9HBI0 331 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
HMGCLL1-202ENST00000308161 PRR33A8MZF0 331 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 H0YCG3 227 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 ABLIM1O14639 778 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 TOM1L1O75674 476 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 IGFBP6P24592 240 aaPredicted RBP18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 TXLNAP40222 546 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 NCKAP1LP55160 1127 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 GPR149Q86SP6 731 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 TDRD5Q8NAT2 981 aaKnown RBP18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 SNX27Q96L92 541 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 CCSER1Q9C0I3 900 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 HCN4Q9Y3Q4 1203 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 PLXNA3P51805 1871 aa18.64■□□□□ 0.57
HMGCLL1-202ENST00000308161 I3L4J1 428 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 HNRNPDLO14979 420 aaKnown RBP18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 CLDN3O15551 220 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 RFPL2O75678 378 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 LIG4P49917 911 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 CREMQ03060 361 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 ELAVL2Q12926 359 aaKnown RBP18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 PSMD5Q16401 504 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 ZPBP2Q6X784 338 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 SNX21Q969T3 373 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 ZMAT2Q96NC0 199 aaKnown RBP18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 DPP7Q9UHL4 492 aa18.63■□□□□ 0.57
HMGCLL1-202ENST00000308161 CCDC195A0A1B0GUA6 201 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 TGM5O43548 720 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 TRAK2O60296 914 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 BRD1O95696 1058 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 DDIT3P35638 169 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 BRCC3P46736 316 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 SOX4Q06945 474 aaPredicted RBP18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 STK38Q15208 465 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 FOXD4L6Q3SYB3 417 aaPredicted RBP18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 RRAGBQ5VZM2 374 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 DCLRE1AQ6PJP8 1040 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 FOXD4L3Q6VB84 417 aaPredicted RBP18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 CCDC149Q6ZUS6 474 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 DYMQ7RTS9 669 aa18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 KRI1Q8N9T8 703 aaKnown RBP18.62■□□□□ 0.57
HMGCLL1-202ENST00000308161 SPRYD3Q8NCJ5 442 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms