RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 LXNQ9BS40 222 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 COL20A1Q9P218 1284 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 ADAMTS1Q9UHI8 967 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 TCP11X1B4DZS4 312 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 CYP2B6P20813 491 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 CCNE1P24864 410 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 RFC5P40937 340 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 HSD17B4P51659 736 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 EPHA7Q15375 998 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 RAD54LQ92698 747 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 DDX12PQ92771 950 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 DHTKD1Q96HY7 919 aaPredicted RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 NAP1L3Q99457 506 aaPredicted RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 GORASP1Q9BQQ3 440 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 NDST4Q9H3R1 872 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 CTTNBP2NLQ9P2B4 639 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 SEPT9Q9UHD8 586 aaPredicted RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 PSAPP07602 524 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 DESP17661 470 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 JAK3P52333 1124 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 IL17AQ16552 155 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 MEA1Q16626 185 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 ACBD5Q5T8D3 534 aaPredicted RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 FAM47EQ6ZV65 393 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 HAS1Q92839 578 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 MTMR9Q96QG7 549 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 P4HBP07237 508 aaKnown RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 CYP3A4P08684 503 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 CIITAP33076 1130 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 QARSP47897 775 aaKnown RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 RASSF2P50749 326 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 MAP7Q14244 749 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 BRDTQ58F21 947 aaPredicted RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 SWSAP1Q6NVH7 229 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 USP38Q8NB14 1042 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 DRAXINQ8NBI3 349 aaPredicted RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 CEP170P1Q96L14 293 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 RPS6KC1Q96S38 1066 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 SH2D3AQ9BRG2 576 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 TMEM165Q9HC07 324 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 ARHGAP20Q9P2F6 1191 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 GABBR1Q9UBS5 961 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 SLC9A2Q9UBY0 812 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 RASGRF2O14827 1237 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 LIN7AO14910 233 aaPredicted RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 GCNT3O95395 438 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 GGPS1O95749 300 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 KLHDC7AQ5VTJ3 777 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 C4orf32Q8N8J7 132 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 SPATA20Q8TB22 786 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 LRRC8CQ8TDW0 803 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 PBKQ96KB5 322 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 LSM14BQ9BX40 385 aaKnown RBP11.64□□□□□ -0.55
LSM3-201ENST00000306024 INTUQ9ULD6 942 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 DAAM1Q9Y4D1 1078 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 PCDHA10Q9Y5I2 948 aa11.64□□□□□ -0.55
LSM3-201ENST00000306024 DCDC2CA8MYV0 355 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 TXNP10599 105 aaKnown RBP11.63□□□□□ -0.55
LSM3-201ENST00000306024 ITGB5P18084 799 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 TTLL4Q14679 1199 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 SH2D4BQ5SQS7 431 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 FAM102BQ5T8I3 360 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 CYP4F22Q6NT55 531 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 PLEKHH3Q7Z736 793 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 VTI1AQ96AJ9 217 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 MCUR1Q96AQ8 359 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 GPRASP2Q96D09 838 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 BICD1Q96G01 975 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 IWS1Q96ST2 819 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 NUDT12Q9BQG2 462 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 RBPJLQ9UBG7 517 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 SLC12A6Q9UHW9 1150 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 COL4A3BPQ9Y5P4 624 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 TTI1O43156 1089 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 MYL1P05976 194 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 KRT16P08779 473 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 MARK3P27448 753 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 SFNP31947 248 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 ZBTB16Q05516 673 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 LRRC41Q15345 812 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 Q3C1V9 767 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 C6orf118Q5T5N4 469 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 TCERG1LQ5VWI1 586 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 FAM160B1Q5W0V3 765 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 HS2ST1Q7LGA3 356 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 VSIG10LQ86VR7 867 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 CATSPER3Q86XQ3 398 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 DNERQ8NFT8 737 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 EPAS1Q99814 870 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 PORCNQ9H237 461 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 UNC45AQ9H3U1 944 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 GOLPH3Q9H4A6 298 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 PLAGL2Q9UPG8 496 aa11.63□□□□□ -0.55
LSM3-201ENST00000306024 UNCXA6NJT0 531 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms