RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 PSME4Q14997 1843 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 ANKRD62A6NC57 917 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 FAM187AA6NFU0 413 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 RIMBP2O15034 1052 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 ZCCHC18P0CG32 403 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 PYGBP11216 843 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 VPS41P49754 854 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 EIF3BP55884 814 aaKnown RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 CYP4A11Q02928 519 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 MYBPC2Q14324 1141 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 APBB1IPQ7Z5R6 666 aaPredicted RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 CCNJLQ8IV13 435 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 PRELID2Q8N945 189 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 PIGOQ8TEQ8 1089 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 PABPC3Q9H361 631 aaKnown RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 LMCD1Q9NZU5 365 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 SYNPO2Q9UMS6 1093 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 PCDHB13Q9Y5F0 798 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 FOXN3O00409 490 aaPredicted RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 PMM2O15305 246 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 RNF8O76064 485 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 KRT18P05783 430 aaKnown RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 UBTFL6P0CB48 400 aaPredicted RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 ATXN8OSP0DMR3 200 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 CHRNB2P17787 502 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 KCNJ1P48048 391 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 SERPINB4P48594 390 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 CUL3Q13618 768 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 DHX34Q14147 1143 aaKnown RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 CERKLQ49MI3 558 aaPredicted RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 EPC2Q52LR7 807 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 SYDE2Q5VT97 1194 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 ARHGAP22Q7Z5H3 698 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 FBXO11Q86XK2 927 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 MFN1Q8IWA4 741 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 PLEKHO2Q8TD55 490 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 DNAJC9Q8WXX5 260 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 TEKT1Q969V4 418 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 C18orf8Q96DM3 657 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 FGD4Q96M96 766 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 TGS1Q96RS0 853 aaKnown RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 PI4KBQ9UBF8 816 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 SEL1LQ9UBV2 794 aa8.49□□□□□ -1.05
NKRF-201ENST00000304449 CNOT7Q9UIV1 285 aaKnown RBP8.49□□□□□ -1.05
NKRF-201ENST00000304449 HLA-DOAP06340 250 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 ETS2P15036 469 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 EPHB2P29323 1055 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 HOXA13P31271 388 aaPredicted RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 PTDSS1P48651 473 aaKnown RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 DLG4P78352 724 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 BNIP1Q12981 228 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 CNGA2Q16280 664 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 TSNAXIP1Q2TAA8 658 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 TMEM179Q6ZVK1 233 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 JAMLQ86YT9 394 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 PHC3Q8NDX5 983 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 SLC20A1Q8WUM9 679 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 KRT35Q92764 455 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 DYDC2Q96IM9 177 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 DEFB129Q9H1M3 183 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 KCND2Q9NZV8 630 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 NOCTQ9UK39 431 aaKnown RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 CBX6O95503 412 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 OAS1P00973 400 aaKnown RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 MARCKSL1P49006 195 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 TRIP13Q15645 432 aaPredicted RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 C12orf56Q8IXR9 622 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 PCDHB18PQ96TA0 734 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 GORASP1Q9BQQ3 440 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 PARVGQ9HBI0 331 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.48□□□□□ -1.059e-10■■■■■ 86.9
NKRF-201ENST00000304449 ARL2BPQ9Y2Y0 163 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 ALG6Q9Y672 507 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 RFX1P22670 979 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 SP100P23497 879 aaPredicted RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 RPL21P46778 160 aaKnown RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 CACNB3P54284 484 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 BFSP1Q12934 665 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 PPP2R5EQ16537 467 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 DOK7Q18PE1 504 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 TAOK1Q7L7X3 1001 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 EXOC3L1Q86VI1 746 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 VPS36Q86VN1 386 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 ARHGEF19Q8IW93 802 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 SRRM1Q8IYB3 904 aaKnown RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 C12orf50Q8NA57 414 aaPredicted RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 DRAXINQ8NBI3 349 aaPredicted RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 ART4Q93070 314 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 AGPAT1Q99943 283 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 UBE2OQ9C0C9 1292 aaKnown RBP8.48□□□□□ -1.05
NKRF-201ENST00000304449 VCXQ9H320 206 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 ARHGEF3Q9NR81 526 aa8.48□□□□□ -1.05
NKRF-201ENST00000304449 TCRBV7S2A1N4TA0A589 114 aa8.47□□□□□ -1.05
NKRF-201ENST00000304449 ANKRD63C9JTQ0 380 aa8.47□□□□□ -1.05
NKRF-201ENST00000304449 GRIN3BO60391 1043 aa8.47□□□□□ -1.05
NKRF-201ENST00000304449 PHF2O75151 1096 aa8.47□□□□□ -1.05
NKRF-201ENST00000304449 VIL1P09327 827 aaKnown RBP8.47□□□□□ -1.05
NKRF-201ENST00000304449 TRIM49P0CI25 452 aa8.47□□□□□ -1.05
NKRF-201ENST00000304449 TRIM49CP0CI26 452 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms