RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 GLYCTKQ8IVS8 523 aa11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 RNF168Q8IYW5 571 aaPredicted RBP11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 TDRD5Q8NAT2 981 aaKnown RBP11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 RIN2Q8WYP3 895 aaPredicted RBP11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 B3GALT6Q96L58 329 aa11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 TARS2Q9BW92 718 aaKnown RBP11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 GPR62Q9BZJ7 368 aa11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 CDT1Q9H211 546 aa11.92□□□□□ -0.5
HMGN1P35-201ENST00000303758 NPHP3-ACAD11A0A0J9YXS1 232 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 LILRB3O75022 631 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 FAM13AO94988 1023 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 MYBP10242 640 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 MCF2P10911 925 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 PLCG1P19174 1290 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 SYT1P21579 422 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 TXLNAP40222 546 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 ELAVL2Q12926 359 aaKnown RBP11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 NOLC1Q14978 699 aaKnown RBP eCLIP11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 KARSQ15046 597 aaKnown RBP11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 FAM171A1Q5VUB5 890 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 KANK3Q6NY19 840 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 CCDC149Q6ZUS6 474 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 PALB2Q86YC2 1186 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 CEP120Q8N960 986 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 SPIRE2Q8WWL2 714 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 EDAQ92838 391 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 INTS4Q96HW7 963 aaKnown RBP11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 UROC1Q96N76 676 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 ACAP3Q96P50 834 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 TTPALQ9BTX7 342 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 ZHX3Q9H4I2 956 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 RXFP1Q9HBX9 757 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 CHST7Q9NS84 486 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 ODF2LQ9ULJ1 636 aa11.91□□□□□ -0.5
HMGN1P35-201ENST00000303758 VWA8A3KMH1 1905 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 C2CD4DB7Z1M9 353 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 K7ENM7 598 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 TOM1L1O75674 476 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 EFEMP2O95967 443 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 MAPTP10636 758 aaKnown RBP11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 ZXDAP98168 799 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 CEBPZQ03701 1054 aaKnown RBP11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 MCM6Q14566 821 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 PSMD5Q16401 504 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 PTPN21Q16825 1174 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 TAS1R3Q7RTX0 852 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 GPR149Q86SP6 731 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 MYCT1Q8N699 235 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 TMEM161BQ8NDZ6 487 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 RAD54LQ92698 747 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 ACSF2Q96CM8 615 aaPredicted RBP11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 REEP2Q9BRK0 252 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 CXCL16Q9H2A7 254 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 PIDD1Q9HB75 910 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 SLC38A7Q9NVC3 462 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 FNIP2Q9P278 1114 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 CCDC39Q9UFE4 941 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 CLIC4Q9Y696 253 aa11.9□□□□□ -0.5
HMGN1P35-201ENST00000303758 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 TMEM221A6NGB7 291 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 M0R296 226 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 TRAPPC3O43617 180 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 GABBR2O75899 941 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 B3GAT3O94766 335 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 HSP90AA1P07900 732 aaKnown RBP11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 SPATA31D3P0C874 917 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 RPL17P18621 184 aaKnown RBP11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 LIG4P49917 911 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 CLCNKBP51801 687 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 NCKAP1LP55160 1127 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 GRIN1Q05586 938 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 RESTQ13127 1097 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 NAB2Q15742 525 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 ARSHQ5FYA8 562 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 RTP2Q5QGT7 225 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 LIN9Q5TKA1 542 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 PRSS55Q6UWB4 352 aaPredicted RBP11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 ZPBP2Q6X784 338 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 SPATA31D4Q6ZUB0 917 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 GPR65Q8IYL9 337 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 HDAC7Q8WUI4 952 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 FAM122AQ96E09 287 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 SNX27Q96L92 541 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 MFSD14AQ96MC6 490 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 NTPCRQ9BSD7 190 aaKnown RBP11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 PLEKHA4Q9H4M7 779 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
HMGN1P35-201ENST00000303758 GOLGA2P5Q9HBQ8 144 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms