RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 DGCR14Q96DF8 476 aaKnown RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ERP44Q9BS26 406 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ETNK1Q9HBU6 452 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 NOD2Q9HC29 1040 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ZNF219Q9P2Y4 722 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 RASA4BC9J798 803 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 RASA4O43374 803 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 MBD4O95243 580 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 PDE8BO95263 885 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 STIP1P31948 543 aaKnown RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TBX2Q13207 712 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 RFX4Q33E94 735 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TIMM50Q3ZCQ8 353 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 LRRC38Q5VT99 294 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 SHQ1Q6PI26 577 aaKnown RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 LINC00299Q6ZSB3 139 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 EPM2AIP1Q7L775 607 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ABI1Q8IZP0 508 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 SLC10A4Q96EP9 437 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 MAGEB10Q96LZ2 347 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TSPAN18Q96SJ8 248 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 CAAP1Q9H8G2 361 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 RABGEF1Q9UJ41 708 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 HEATR1Q9H583 2144 aaKnown RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 KPNA4O00629 521 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TCEA3O75764 348 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ALADP13716 330 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 IL10P22301 178 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 IL12AP29459 219 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ADD2P35612 726 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TFDP1Q14186 410 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ARMCX5Q6P1M9 558 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 DNAJB7Q7Z6W7 309 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 FAM160B2Q86V87 743 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TC2NQ8N9U0 490 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ACMSDQ8TDX5 336 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 BHMTQ93088 406 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TSPAN17Q96FV3 270 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 APOL4Q9BPW4 351 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 PDCD10Q9BUL8 212 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TRIM39Q9HCM9 518 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 TUFT1Q9NNX1 390 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 ARHGEF3Q9NR81 526 aa5.53□□□□□ -1.52
SCN1A-201ENST00000303395 CPSF3Q9UKF6 684 aaKnown RBP5.53□□□□□ -1.52
SCN1A-201ENST00000303395 A0A0B4J269 797 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 TRPC5OSA6NMA1 111 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 MATN2O00339 956 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 RGS5O15539 181 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 VPS4BO75351 444 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 RASSF9O75901 435 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 LSM8O95777 96 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 IMPDH2P12268 514 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ABCB4P21439 1286 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 CDK16Q00536 496 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PPIL2Q13356 520 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 TUBB3Q13509 450 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 TUBA3CQ13748 450 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ACAP1Q15027 740 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 CWF19L2Q2TBE0 894 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 RWDD4Q6NW29 188 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PARVGQ9HBI0 331 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 GINS2Q9Y248 185 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 MROH7Q68CQ1 1323 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 DNAJA2O60884 412 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 GPC4O75487 556 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PHKA1P46020 1223 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ZNF568Q3ZCX4 644 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 RNF43Q68DV7 783 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 FASTKD5Q7L8L6 764 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ARCQ7LC44 396 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ARHGAP22Q7Z5H3 698 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 TTC30AQ86WT1 665 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 SEC16BQ96JE7 1060 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 TBCBQ99426 244 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 SUN2Q9UH99 717 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 POTECB2RU33 542 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PIK3R2O00459 728 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 EIF4A3P38919 411 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PTGDRQ13258 359 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 AARS2Q5JTZ9 985 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 FAM83BQ5T0W9 1011 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 EXD1Q8NHP7 514 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 SNX19Q92543 992 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 MIEF2Q96C03 454 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 YTHDF1Q9BYJ9 559 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 AZI2Q9H6S1 392 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 SLC12A6Q9UHW9 1150 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 DBNLQ9UJU6 430 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PCDHGC5Q9Y5F6 944 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 NWD1Q149M9 1564 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PTPRMP28827 1452 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 PNMA6EA0A0J9YXQ4 647 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ERI2A8K979 691 aaKnown RBP5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ARIH2O95376 493 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 NR2F2P24468 414 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 CDC27P30260 824 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 GPR1P46091 355 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 ZNF394Q53GI3 561 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 DCLK2Q8N568 766 aa5.52□□□□□ -1.53
SCN1A-201ENST00000303395 DDHD1Q8NEL9 900 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms