RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 NCBP1Q09161 790 aaKnown RBP12.36□□□□□ -0.43
CLCC1-201ENST00000302500 CLUL1Q15846 466 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 UPP1Q16831 310 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 RTP2Q5QGT7 225 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 ZBTB41Q5SVQ8 909 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 FUT10Q6P4F1 479 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 CNNM4Q6P4Q7 775 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 TMC7Q7Z402 723 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
CLCC1-201ENST00000302500 RABGGTAQ92696 567 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 CALML4Q96GE6 196 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 B3GALT6Q96L58 329 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 RPS6KC1Q96S38 1066 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 TRIM6Q9C030 488 aaPredicted RBP12.36□□□□□ -0.43
CLCC1-201ENST00000302500 KBTBD4Q9NVX7 518 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 TBX20Q9UMR3 447 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 PRG3Q9Y2Y8 225 aaPredicted RBP12.36□□□□□ -0.43
CLCC1-201ENST00000302500 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 TISP43B9A030 160 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 TEX28O15482 410 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 C1RP00736 705 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 ADSSP30520 456 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 NDUFV1P49821 464 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 CASP5P51878 434 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 KCNA1Q09470 495 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
CLCC1-201ENST00000302500 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
CLCC1-201ENST00000302500 ZNF568Q3ZCX4 644 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 ZNF720Q7Z2F6 126 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 RHOBTB2Q9BYZ6 727 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 PARVGQ9HBI0 331 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 GOLGA2P5Q9HBQ8 144 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 LARSQ9P2J5 1176 aaKnown RBP12.35□□□□□ -0.43
CLCC1-201ENST00000302500 TFIP11Q9UBB9 837 aaKnown RBP12.35□□□□□ -0.43
CLCC1-201ENST00000302500 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
CLCC1-201ENST00000302500 A0A0B4J269 797 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 ANKRD63C9JTQ0 380 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 SPTLC2O15270 562 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 TRAK2O60296 914 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 TBC1D4O60343 1298 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 THP07101 528 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 PDIA4P13667 645 aaKnown RBP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 HOXB8P17481 243 aaPredicted RBP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 SCP2P22307 547 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 NMT1P30419 496 aaKnown RBP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 HOXD13P35453 343 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 TNFSF9P41273 254 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 OR1G1P47890 313 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 ZC2HC1CQ53FD0 456 aaPredicted RBP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 CRELD2Q6UXH1 353 aaPredicted RBP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 GJD3Q8N144 294 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 LNX1Q8TBB1 728 aaPredicted RBP12.34□□□□□ -0.43
CLCC1-201ENST00000302500 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 DDX12PQ92771 950 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 CDK5RAP3Q96JB5 506 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 ADPGKQ9BRR6 497 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 OLFML3Q9NRN5 406 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 FNIP2Q9P278 1114 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 PARP2Q9UGN5 583 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 GDAQ9Y2T3 454 aa12.34□□□□□ -0.43
CLCC1-201ENST00000302500 FAM237AA0A1B0GTK4 181 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 ADAM12O43184 909 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 FGFR3P22607 806 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLCC1-201ENST00000302500 CLCNKBP51801 687 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLCC1-201ENST00000302500 ENOX2Q16206 610 aaKnown RBP12.33□□□□□ -0.44
CLCC1-201ENST00000302500 SEZ6Q53EL9 994 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 RSPO2Q6UXX9 243 aaPredicted RBP12.33□□□□□ -0.44
CLCC1-201ENST00000302500 SFR1Q86XK3 245 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 HACE1Q8IYU2 909 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 PIK3R5Q8WYR1 880 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 ZNF707Q96C28 371 aaPredicted RBP12.33□□□□□ -0.44
CLCC1-201ENST00000302500 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 ADAM7Q9H2U9 754 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 CPSF3Q9UKF6 684 aaKnown RBP12.33□□□□□ -0.44
CLCC1-201ENST00000302500 PCDHA7Q9UN72 937 aa12.33□□□□□ -0.44
CLCC1-201ENST00000302500 USP34Q70CQ2 3546 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 LIG1P18858 919 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 GLUD2P49448 558 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 SMTNP53814 917 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 WNT7BP56706 349 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 DNM1Q05193 864 aaKnown RBP12.32□□□□□ -0.44
CLCC1-201ENST00000302500 MRPL58Q14197 206 aaKnown RBP12.32□□□□□ -0.44
CLCC1-201ENST00000302500 RESP18Q5W5W9 173 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 ATL3Q6DD88 541 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms