RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 LONP2Q86WA8 852 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 RAB11FIP4Q86YS3 637 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 TBCKQ8TEA7 893 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 DEPDC1BQ8WUY9 529 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 UROC1Q96N76 676 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 NAP1L4Q99733 375 aaKnown RBP7.2□□□□□ -1.26
ITGB1-201ENST00000302278 SEMA4GQ9NTN9 838 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 DDX11L8A8MPP1 907 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 STK25O00506 426 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 C2CD2LO14523 706 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 PTGESO14684 152 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 ARF4P18085 180 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-201ENST00000302278 ADD1P35611 737 aaKnown RBP7.2□□□□□ -1.26
ITGB1-201ENST00000302278 MRPL58Q14197 206 aaKnown RBP7.2□□□□□ -1.26
ITGB1-201ENST00000302278 PSMD5Q16401 504 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 PLA2G4FQ68DD2 849 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 PALB2Q86YC2 1186 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 SYNPOQ8N3V7 929 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 SPEM1Q8N4L4 309 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 LEMD2Q8NC56 503 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 E2F7Q96AV8 911 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 MTRQ99707 1265 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 CCDC113Q9H0I3 377 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 ANKEF1Q9NU02 776 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 ANGPTL2Q9UKU9 493 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 PRG3Q9Y2Y8 225 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-201ENST00000302278 KIF4AO95239 1232 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 TDP2O95551 362 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 CAPSQ13938 189 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 TFDP1Q14186 410 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 UBXN2BQ14CS0 331 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 ADCK5Q3MIX3 580 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 ZFP42Q96MM3 310 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 FZD8Q9H461 694 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 NXF3Q9H4D5 531 aaKnown RBP7.2□□□□□ -1.26
ITGB1-201ENST00000302278 PTPRDP23468 1912 aa7.2□□□□□ -1.26
ITGB1-201ENST00000302278 RIF1Q5UIP0 2472 aaKnown RBP7.2□□□□□ -1.26
ITGB1-201ENST00000302278 XRCC6P12956 609 aaKnown RBP eCLIP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 YWHABP31946 246 aaKnown RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 SLC5A9Q2M3M2 681 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 PABPC1LQ4VXU2 614 aaKnown RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 LIN9Q5TKA1 542 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 TCEAL8Q8IYN2 117 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 HAS1Q92839 578 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 ZC3H10Q96K80 434 aaKnown RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 ASB16Q96NS5 453 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 ZNF334Q9HCZ1 680 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 PCDHGA5Q9Y5G8 931 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 DCDC2BA2VCK2 349 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 EPB41L2O43491 1005 aaKnown RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 MOSPD3O75425 235 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 ERLIN2O94905 339 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 ZNF806P0C7X5 589 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 NTHL1P78549 312 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 FCHO2Q0JRZ9 810 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 WDR44Q5JSH3 913 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 PRSS55Q6UWB4 352 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 OTUD6AQ7L8S5 288 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 RASEFQ8IZ41 740 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 PPP1R10Q96QC0 940 aaKnown RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 KXD1Q9BQD3 176 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 OBP2AQ9NY56 170 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 CITO14578 2027 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 WDR27A2RRH5 827 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 ADAM12O43184 909 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 CHMP2AO43633 222 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 SLC37A4O43826 429 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 DGAT1O75907 488 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 SPATA31D3P0C874 917 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 BMP2KLQ5H9B9 411 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 AXDND1Q5T1B0 1012 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 SPATA31D4Q6ZUB0 917 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 RNF149Q8NC42 400 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 BEST2Q8NFU1 509 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 CEP170P1Q96L14 293 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 B3GALT6Q96L58 329 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 USP18Q9UMW8 372 aa7.19□□□□□ -1.26
ITGB1-201ENST00000302278 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.19□□□□□ -1.26
ITGB1-201ENST00000302278 ANK1P16157 1881 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 HRO43593 1189 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 NPEPPSP55786 919 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 LRRC32Q14392 662 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 LONRF3Q496Y0 759 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 ALKAL1Q6UXT8 129 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 KRT25Q7Z3Z0 450 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 ASAP3Q8TDY4 903 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 TMEM143Q96AN5 459 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 HSD17B14Q9BPX1 270 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 ZSWIM4Q9H7M6 989 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 DDX25Q9UHL0 483 aaKnown RBP7.18□□□□□ -1.26
ITGB1-201ENST00000302278 MYBPHLA2RUH7 354 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 N4BP3O15049 544 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 RHOP08100 348 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 CEBPBP17676 345 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 RPL17P18621 184 aaKnown RBP7.18□□□□□ -1.26
ITGB1-201ENST00000302278 GLRA2P23416 452 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 NCBP1Q09161 790 aaKnown RBP7.18□□□□□ -1.26
ITGB1-201ENST00000302278 GAS6Q14393 721 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 DGKKQ5KSL6 1271 aa7.18□□□□□ -1.26
ITGB1-201ENST00000302278 N4BP2L1Q5TBK1 243 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms