RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 CXorf38Q8TB03 319 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 RNF34Q969K3 372 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 MAGEB18Q96M61 343 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 ACAP3Q96P50 834 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.17■□□□□ 0.18
DDB1-201ENST00000301764 RIPK2O43353 540 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 KLRC4O43908 158 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 SNX3O60493 162 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 AKAP3O75969 853 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 PGM2Q96G03 612 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 SYNJ2BP-COX16A0A087WUM0 186 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 HSPA4LO95757 839 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 RPL21P46778 160 aaKnown RBP16.17■□□□□ 0.18
DDB1-201ENST00000301764 FNTAP49354 379 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 YARSP54577 528 aaKnown RBP16.17■□□□□ 0.18
DDB1-201ENST00000301764 SNX16P57768 344 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 FBXL13Q8NEE6 735 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 XAB2Q9HCS7 855 aaKnown RBP16.17■□□□□ 0.18
DDB1-201ENST00000301764 COX16Q9P0S2 106 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 MAGEA13PA6NCF6 341 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 KRT4P19013 534 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 LMBRD2Q68DH5 695 aaPredicted RBP16.17■□□□□ 0.18
DDB1-201ENST00000301764 ATP8B4Q8TF62 1192 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 DTNBP1Q96EV8 351 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 INPP4AQ96PE3 977 aaPredicted RBP16.17■□□□□ 0.18
DDB1-201ENST00000301764 CSRNP1Q96S65 589 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 LXNQ9BS40 222 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 HEY1Q9Y5J3 304 aa16.17■□□□□ 0.18
DDB1-201ENST00000301764 SLIT1O75093 1534 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 MTDHQ86UE4 582 aaKnown RBP16.16■□□□□ 0.18
DDB1-201ENST00000301764 RHBDL2Q9NX52 303 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 MTMR4Q9NYA4 1195 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 ARHGAP10A1A4S6 786 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 RALAP11233 206 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 TAF1BQ53T94 588 aaPredicted RBP16.16■□□□□ 0.18
DDB1-201ENST00000301764 THEMIS2Q5TEJ8 643 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 MIGA2Q7L4E1 593 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 CCDC97Q96F63 343 aaPredicted RBP16.16■□□□□ 0.18
DDB1-201ENST00000301764 EFHD1Q9BUP0 239 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 DNM1LO00429 736 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 EPHB2P29323 1055 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 CYTH1Q15438 398 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 HAUS6Q7Z4H7 955 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 NT5DC3Q86UY8 548 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 CD209Q9NNX6 404 aa16.16■□□□□ 0.18
DDB1-201ENST00000301764 NGRNQ9NPE2 291 aaKnown RBP16.16■□□□□ 0.18
DDB1-201ENST00000301764 A6NJR5 290 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 SRRM3A6NNA2 597 aaPredicted RBP16.15■□□□□ 0.18
DDB1-201ENST00000301764 GIPC1O14908 333 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 EIF2AK2P19525 551 aaKnown RBP16.15■□□□□ 0.18
DDB1-201ENST00000301764 EEF1B2P24534 225 aaKnown RBP16.15■□□□□ 0.18
DDB1-201ENST00000301764 ZNF543Q08ER8 600 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 IL17AQ16552 155 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 C3orf62Q6ZUJ4 267 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 CATSPER3Q86XQ3 398 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 TMEM35BQ8NCS4 154 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 OSBPL7Q9BZF2 842 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 PFDN4Q9NQP4 134 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 MYO3BQ8WXR4 1341 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 DENND3A2RUS2 1198 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 BTKQ06187 659 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 CRELD2Q6UXH1 353 aaPredicted RBP16.15■□□□□ 0.18
DDB1-201ENST00000301764 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 AGR3Q8TD06 166 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 ATP6V0A1Q93050 837 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 PXDNQ92626 1479 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 PPP1R2P3Q6NXS1 205 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 DNAAF3Q8N9W5 541 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 TTC13Q8NBP0 860 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
DDB1-201ENST00000301764 MTRQ99707 1265 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 PDP2Q9P2J9 529 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 NAALADL1Q9UQQ1 740 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 DDX3XO00571 662 aaKnown RBP eCLIP16.15■□□□□ 0.182e-22■■■■□ 23.7
DDB1-201ENST00000301764 PRPSAP2O60256 369 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 ATP9AO75110 1047 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 CBX6O95503 412 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 TTC4O95801 387 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 GNA15P30679 374 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 CNGA3Q16281 694 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 MTERF2Q49AM1 385 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 C2CD6Q53TS8 623 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 PPP6R3Q5H9R7 873 aaPredicted RBP16.15■□□□□ 0.18
DDB1-201ENST00000301764 BZW1Q7L1Q6 419 aaKnown RBP16.15■□□□□ 0.18
DDB1-201ENST00000301764 BAP1Q92560 729 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 VPS11Q9H270 941 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 PI4KBQ9UBF8 816 aa16.15■□□□□ 0.18
DDB1-201ENST00000301764 PALM3A6NDB9 673 aaPredicted RBP16.14■□□□□ 0.17
DDB1-201ENST00000301764 GSTA2P09210 222 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 P4HA1P13674 534 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 FLT3P36888 993 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 NPEPPSP55786 919 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 SNX30Q5VWJ9 437 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 MANSC1Q9H8J5 431 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 HESX1Q9UBX0 185 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 SLC9A2Q9UBY0 812 aa16.14■□□□□ 0.17
DDB1-201ENST00000301764 PNMA3Q9UL41 463 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms