RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 BTNL9Q6UXG8 535 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 BEST2Q8NFU1 509 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 RAD54LQ92698 747 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 RIC8BQ9NVN3 520 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 M0R2C6 588 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 NUP62P37198 522 aaPredicted RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 CORO7P57737 925 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 DDIASQ8IXT1 998 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 DYTNA2CJ06 578 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 PIGHQ14442 188 aaPredicted RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 PLA2R1Q13018 1463 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 AKAP10O43572 662 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 DTNBO60941 627 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 ANXA11P50995 505 aaKnown RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 STX3Q13277 289 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 MAPK6Q16659 721 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 PRMT1Q99873 361 aaKnown RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 USP32Q8NFA0 1604 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 PDXDC2PQ6P474 469 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 TRAPPC11Q7Z392 1133 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 SZRD1Q7Z422 152 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 CMTR1Q8N1G2 835 aaKnown RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 ZFRQ96KR1 1074 aaKnown RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 FAM167BQ9BTA0 163 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 CLIC2O15247 247 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 SRP72O76094 671 aaKnown RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 IMPDH2P12268 514 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 STAT3P40763 770 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 PRELPP51888 382 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 NCKAP1LP55160 1127 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 STX5Q13190 355 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 GPR141Q7Z602 305 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 FRMPD1Q5SYB0 1578 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 GNA15P30679 374 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 PFKFB3Q16875 520 aaPredicted RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 TMEM179Q6ZVK1 233 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 DPP9Q86TI2 863 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 AGBL1Q96MI9 1066 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 MBD5Q9P267 1494 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 A0A1W2PQJ5 194 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 KCNA2P16389 499 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 RXRGP48443 463 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 JADE3Q92613 823 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 EGFL8Q99944 293 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 FAM192AQ9GZU8 254 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 TMEM51Q9NW97 253 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 NMRK1Q9NWW6 199 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 KITP10721 976 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 EIF2B5Q13144 721 aaKnown RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 IKBIPQ70UQ0 350 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 C7orf31Q8N865 590 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 CYP4F11Q9HBI6 524 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 ABCC3O15438 1527 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 ALBP02768 609 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 FBXW4P57775 412 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 ACTN3Q08043 901 aaPredicted RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 NSUN2Q08J23 767 aaKnown RBP eCLIP11.87□□□□□ -0.51
GCN1-201ENST00000300648 TMEM154Q6P9G4 183 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 CYFIP1Q7L576 1253 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 CYGBQ8WWM9 190 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 CNGB3Q9NQW8 809 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 BCAMP50895 628 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 CENPCQ03188 943 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 SLC18A3Q16572 532 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 EXT2Q93063 718 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 ARHGEF26Q96DR7 871 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 SEC16BQ96JE7 1060 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 SP110Q9HB58 689 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.87□□□□□ -0.51
GCN1-201ENST00000300648 ITM2BQ9Y287 266 aa11.87□□□□□ -0.51
GCN1-201ENST00000300648 TTC39BQ5VTQ0 682 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 PLEKHA5Q9HAU0 1116 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 VAMP7P51809 220 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 KRT17Q04695 432 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 NECTIN1Q15223 517 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 TMEM270Q6UE05 265 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 RHPN2Q8IUC4 686 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 FMR1NBQ8N0W7 255 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 ZNF560Q96MR9 790 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 PAGR1Q9BTK6 254 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 PSMD14O00487 310 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 ZBTB5O15062 677 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 MYL2P10916 166 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 VCAM1P19320 739 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 KRT20P35900 424 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms