RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 WDR64B1ANS9 1081 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 SLITRK3O94933 977 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 ELF1P32519 619 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 SERPINB6P35237 376 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 ORC2Q13416 577 aaPredicted RBP14.14□□□□□ -0.15
CASC4-201ENST00000299957 PDIK1LQ8N165 341 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 CALR3Q96L12 384 aaKnown RBP14.14□□□□□ -0.15
CASC4-201ENST00000299957 TSNARE1Q96NA8 513 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 ZSWIM1Q9BR11 485 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 TRIM6Q9C030 488 aaPredicted RBP14.14□□□□□ -0.15
CASC4-201ENST00000299957 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 TRABDQ9H4I3 376 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 UBN1Q9NPG3 1134 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 ABCF3Q9NUQ8 709 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 ZHX2Q9Y6X8 837 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 EPHB1P54762 984 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 GEN1Q17RS7 908 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 C1orf228Q6PIY5 440 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 IRF2BP2Q7Z5L9 587 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 LNX1Q8TBB1 728 aaPredicted RBP14.14□□□□□ -0.15
CASC4-201ENST00000299957 RNF34Q969K3 372 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 MCEEQ96PE7 176 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 TAAR1Q96RJ0 339 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 TARS2Q9BW92 718 aaKnown RBP14.14□□□□□ -0.15
CASC4-201ENST00000299957 OSBPL8Q9BZF1 889 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 POLR3FQ9H1D9 316 aaPredicted RBP14.14□□□□□ -0.15
CASC4-201ENST00000299957 RBAKQ9NYW8 714 aaPredicted RBP14.14□□□□□ -0.15
CASC4-201ENST00000299957 PCDHGC5Q9Y5F6 944 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 UPP2O95045 317 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 PPP3CAQ08209 521 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 GADL1Q6ZQY3 521 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 CENPUQ71F23 418 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 TRIM33Q9UPN9 1127 aa14.14□□□□□ -0.15
CASC4-201ENST00000299957 TCRBV7S2A1N4TA0A589 114 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 GYG2O15488 501 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 ASNSP08243 561 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 RARAP10276 462 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 SLC12A3P55017 1021 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 TMPRSS15P98073 1019 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 KRT27Q7Z3Y8 459 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 RNF169Q8NCN4 708 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 ACTRT1Q8TDG2 376 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 HEXIM2Q96MH2 286 aaKnown RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 CYP4F11Q9HBI6 524 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 CHST7Q9NS84 486 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 HAO1Q9UJM8 370 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 MAPK13O15264 365 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 TNNC2P02585 160 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 ZSCAN5DPP0CG00 497 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 SARNPP82979 210 aaKnown RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 KDSRQ06136 332 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 ITGB3BPQ13352 177 aaPredicted RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 AMIGO3Q86WK7 504 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 OSBPL1AQ9BXW6 950 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 GANQ9H2C0 597 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 NYAP2Q9P242 653 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 SAE1Q9UBE0 346 aaPredicted RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 ZFP69BQ9UJL9 534 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 PJA2O43164 708 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 ATXN3P54252 364 aaPredicted RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 RPS6P62753 249 aaKnown RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 MKRN3Q13064 507 aaKnown RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 TMEM237Q96Q45 408 aa14.13□□□□□ -0.15
CASC4-201ENST00000299957 AGO2Q9UKV8 859 aaKnown RBP14.13□□□□□ -0.15
CASC4-201ENST00000299957 AGTP01019 485 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 MTMR2Q13614 643 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 GLIS2Q9BZE0 524 aaPredicted RBP14.12□□□□□ -0.15
CASC4-201ENST00000299957 AJAP1Q9UKB5 411 aaPredicted RBP14.12□□□□□ -0.15
CASC4-201ENST00000299957 CHMP2BQ9UQN3 213 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 NEU2Q9Y3R4 380 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 SPATA31A5Q5VU36 1347 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 SPATA31A7Q8IWB4 1347 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 IGSF9BQ9UPX0 1349 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 MEIS2O14770 477 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 MCF2LO15068 1137 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 DKC1O60832 514 aaKnown RBP eCLIP14.12□□□□□ -0.15
CASC4-201ENST00000299957 GCLCP48506 637 aaPredicted RBP14.12□□□□□ -0.15
CASC4-201ENST00000299957 HMGCS2P54868 508 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 ATP13A4Q4VNC1 1196 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 ZSWIM2Q8NEG5 633 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 ATL2Q8NHH9 583 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 VCPKMTQ9H867 229 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 SEL1LQ9UBV2 794 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 UBR1Q8IWV7 1749 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 SLC16A3O15427 465 aaKnown RBP14.12□□□□□ -0.15
CASC4-201ENST00000299957 NCF2P19878 526 aaPredicted RBP14.12□□□□□ -0.15
CASC4-201ENST00000299957 NUMBP49757 651 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 RHOT1Q8IXI2 618 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 PRPF38AQ8NAV1 312 aaKnown RBP14.12□□□□□ -0.15
CASC4-201ENST00000299957 FERMT1Q9BQL6 677 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 MIS12Q9H081 205 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 SUFUQ9UMX1 484 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 MYH2Q9UKX2 1941 aa14.12□□□□□ -0.15
CASC4-201ENST00000299957 CFLARO15519 480 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 CYP11B1P15538 503 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 SEMA3FQ13275 785 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 AGBL2Q5U5Z8 902 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms