RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 KRT15P19012 456 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 NT5C2P49902 561 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ITPK1Q13572 414 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 SPARCL1Q14515 664 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 SPIRE2Q8WWL2 714 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 LRRC19Q9H756 370 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 SMAPO00193 183 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 SGPL1O95470 568 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 PTPN4P29074 926 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 SERPINB4P48594 390 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 GSTO1P78417 241 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 MOGSQ13724 837 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 KIF22Q14807 665 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 DPP8Q6V1X1 898 aaPredicted RBP13.88□□□□□ -0.19
TVP23A-201ENST00000299866 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ARHGEF19Q8IW93 802 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ZFAND2BQ8WV99 257 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 NRG4Q8WWG1 115 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 KAT5Q92993 513 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 MIPEPQ99797 713 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 MTMR4Q9NYA4 1195 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 GRID1Q9ULK0 1009 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 LRCH1Q9Y2L9 728 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.88□□□□□ -0.19
TVP23A-201ENST00000299866 SHANK3Q9BYB0 1731 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ATAD5Q96QE3 1844 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 CAPN9O14815 690 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ASMTLO95671 621 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 UBTFL6P0CB48 400 aaPredicted RBP13.88□□□□□ -0.19
TVP23A-201ENST00000299866 KPNB1Q14974 876 aaKnown RBP13.88□□□□□ -0.19
TVP23A-201ENST00000299866 NLRP9Q7RTR0 991 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ZNF653Q96CK0 615 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 HEMGNQ9BXL5 484 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ANO3Q9BYT9 981 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 ANKRD2Q9GZV1 360 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 BTG4Q9NY30 223 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 G3BP2Q9UN86 482 aaKnown RBP13.88□□□□□ -0.19
TVP23A-201ENST00000299866 FRMPD4Q14CM0 1322 aa13.88□□□□□ -0.19
TVP23A-201ENST00000299866 EXOC1LA0A1B0GW35 172 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 LDHCP07864 332 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 BCRP11274 1271 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 AKR1B1P15121 316 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 CA4P22748 312 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 PICALMQ13492 652 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 C4orf50Q6ZRC1 276 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 C10orf82Q8WW14 230 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 CD101Q93033 1021 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 TRABDQ9H4I3 376 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 LGALS13Q9UHV8 139 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 CFAP69A5D8W1 941 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 EXOC3O60645 756 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 LMNAP02545 664 aaKnown RBP13.87□□□□□ -0.19
TVP23A-201ENST00000299866 IVDP26440 423 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 RPA3P35244 121 aaPredicted RBP13.87□□□□□ -0.19
TVP23A-201ENST00000299866 OVGP1Q12889 678 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 TBC1D25Q3MII6 688 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 CMPK2Q5EBM0 449 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 HHATQ5VTY9 493 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 HS2ST1Q7LGA3 356 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 ZNF804AQ7Z570 1209 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 ARHGAP22Q7Z5H3 698 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 DRAXINQ8NBI3 349 aaPredicted RBP13.87□□□□□ -0.19
TVP23A-201ENST00000299866 CADM1Q9BY67 442 aaKnown RBP13.87□□□□□ -0.19
TVP23A-201ENST00000299866 RABGAP1Q9Y3P9 1069 aa13.87□□□□□ -0.19
TVP23A-201ENST00000299866 ZBTB39O15060 712 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 EDF1O60869 148 aaKnown RBP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 GAS8O95995 478 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 ZCCHC18P0CG32 403 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 RRM1P23921 792 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 RPA1P27694 616 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 HADHBP55084 474 aaKnown RBP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 PPP4CP60510 307 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 PKN2Q16513 984 aaKnown RBP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 BMT2Q1RMZ1 405 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 BRINP3Q76B58 766 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 APLFQ8IW19 511 aaPredicted RBP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 SLFN12Q8IYM2 578 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 SLC5A5Q92911 643 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 RBM5P52756 815 aaKnown RBP eCLIP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 DLG4P78352 724 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 SLC1A5Q15758 541 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 CERKLQ49MI3 558 aaPredicted RBP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 SCYL3Q8IZE3 742 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 HERPUD2Q9BSE4 406 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 RTFDC1Q9BY42 306 aaPredicted RBP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 PCIF1Q9H4Z3 704 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 R3HDM2Q9Y2K5 976 aaKnown RBP13.86□□□□□ -0.19
TVP23A-201ENST00000299866 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 LOC102724428A0A0B4J2F2 783 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 ZBTB5O15062 677 aa13.86□□□□□ -0.19
TVP23A-201ENST00000299866 SIK1P57059 783 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms