RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 RSPH3Q86UC2 560 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 LCA5Q86VQ0 697 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 LINC01465Q8N7H1 131 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 C1orf131Q8NDD1 294 aaKnown RBP11.69□□□□□ -0.54
VWA3A-201ENST00000299840 GIMAP1Q8WWP7 306 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 SCLYQ96I15 445 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 CCDC68Q9H2F9 335 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 HOOK1Q9UJC3 728 aaKnown RBP11.69□□□□□ -0.54
VWA3A-201ENST00000299840 PRELID1Q9Y255 219 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 PTPRSQ13332 1948 aa11.69□□□□□ -0.54
VWA3A-201ENST00000299840 STX6O43752 255 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 C22orf31O95567 290 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 MUTP22033 750 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 KLRC1P26715 233 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 THPOP40225 353 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 MATR3P43243 847 aaKnown RBP eCLIP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 ARPC4P59998 168 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 PHEXP78562 749 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 ATP2C1P98194 919 aaPredicted RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 MGAT3Q09327 533 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 EIF2B5Q13144 721 aaKnown RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 PTGDRQ13258 359 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 SHHQ15465 462 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 HABP4Q5JVS0 413 aaKnown RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 EMC10Q5UCC4 262 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 NUGGCQ68CJ6 796 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 C14orf80Q86SX3 495 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 SPATS2Q86XZ4 545 aaKnown RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 HERVK_113Q902F9 699 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 MPP4Q96JB8 637 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 EIF2AK1Q9BQI3 630 aaKnown RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 ZSWIM4Q9H7M6 989 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 RSPH10B2B2RC85 870 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 ATP9BO43861 1147 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 SLITRK3O94933 977 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 RSPH10BP0C881 870 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 ZNF75DP51815 510 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 IGBP1P78318 339 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 LRIT3Q3SXY7 679 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 CCDC38Q502W7 563 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 FAM228AQ86W67 206 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 TRAPPC12Q8WVT3 735 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 DYDC2Q96IM9 177 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 TCHPQ9BT92 498 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 TUFT1Q9NNX1 390 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 SLC40A1Q9NP59 571 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 ZMAT5Q9UDW3 170 aaKnown RBP11.68□□□□□ -0.54
VWA3A-201ENST00000299840 ITGB1BP2Q9UKP3 347 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 SQORQ9Y6N5 450 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 GBF1Q92538 1859 aa11.68□□□□□ -0.54
VWA3A-201ENST00000299840 BMP15O95972 392 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 LDHAP00338 332 aaKnown RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 FGBP02675 491 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 MBTPS1Q14703 1052 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 TMEM266Q2M3C6 531 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 C9orf50Q5SZB4 431 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 ARL6IP4Q66PJ3 421 aaKnown RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 NEK10Q6ZWH5 1172 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 ZNF365Q70YC5 407 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 B4GALNT4Q76KP1 1039 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 SREK1Q8WXA9 508 aaKnown RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 DHTKD1Q96HY7 919 aaPredicted RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 PREBQ9HCU5 417 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 TMED5Q9Y3A6 229 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 A6NHS1 94 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 MEFVO15553 781 aaPredicted RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 NBNO60934 754 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 FUT4P22083 530 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 OXCT1P55809 520 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 MRPS6P82932 125 aaKnown RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 PABPC1LQ4VXU2 614 aaKnown RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 ANO5Q75V66 913 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 IGSF22Q8N9C0 903 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 LXNQ9BS40 222 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 EPC1Q9H2F5 836 aa11.67□□□□□ -0.54
VWA3A-201ENST00000299840 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
VWA3A-201ENST00000299840 MTRF1O75570 445 aaKnown RBP11.66□□□□□ -0.54
VWA3A-201ENST00000299840 CHRNA1P02708 482 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 SPATA31C1P0DKV0 1188 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 ACRP10323 421 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 TECP42680 631 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 IER5Q5VY09 327 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 KANK3Q6NY19 840 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 CCDC121Q6ZUS5 278 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 WDR75Q8IWA0 830 aaKnown RBP11.66□□□□□ -0.54
VWA3A-201ENST00000299840 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 NSMCE1Q8WV22 266 aa11.66□□□□□ -0.54
VWA3A-201ENST00000299840 HVCN1Q96D96 273 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms