RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.31
SLX4-201ENST00000294008 HIST2H2ACQ16777 129 aaPredicted RBP13.08□□□□□ -0.31
SLX4-201ENST00000294008 HIST2H2AA3Q6FI13 130 aa13.08□□□□□ -0.31
SLX4-201ENST00000294008 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.31
SLX4-201ENST00000294008 SPRTNQ9H040 489 aaPredicted RBP13.08□□□□□ -0.31
SLX4-201ENST00000294008 CNOT8Q9UFF9 292 aaKnown RBP13.08□□□□□ -0.31
SLX4-201ENST00000294008 USP17L8P0C7I0 530 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 GPS1Q13098 491 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 NNTQ13423 1086 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 ESRP1Q6NXG1 681 aaKnown RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 MMGT1Q8N4V1 131 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 POLG2Q9UHN1 485 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 A0A087WUV0 522 aaPredicted RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 EIF2S1P05198 315 aaKnown RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 CHRM3P20309 590 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 NDUFA8P51970 172 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 NSD2O96028 1365 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 TRIM13O60858 407 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 ABCD1P33897 745 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 GCLMP48507 274 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 LPIN1Q14693 890 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 HEATR4Q86WZ0 1026 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 DENND6AQ8IWF6 608 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 HOXC10Q9NYD6 342 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 AKAP7Q9P0M2 348 aaPredicted RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 PI4KBQ9UBF8 816 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 CTIFO43310 598 aaKnown RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 PFKFB2O60825 505 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 PSMC3P17980 439 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 RGS7P49802 495 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 LAYNQ6UX15 382 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 P2RX5Q93086 422 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 SEMA3EO15041 775 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 DYNC1I2Q13409 638 aaKnown RBP13.08□□□□□ -0.32
SLX4-201ENST00000294008 CAMK1Q14012 370 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 VPS37AQ8NEZ2 397 aa13.08□□□□□ -0.32
SLX4-201ENST00000294008 CAND2O75155 1236 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 AP1G2O75843 785 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 SCGNO76038 276 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 PRIM2P49643 509 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 HSD17B4P51659 736 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 PPP1R2P3Q6NXS1 205 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 GREM2Q9H772 168 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 ZFATQ9P243 1243 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 BIRC5O15392 142 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 GUCY1A3Q02108 690 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 ATPAF2Q8N5M1 289 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 AP3D1O14617 1153 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 FGGP02679 453 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 RANBP1P43487 201 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 GPSM2P81274 684 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 KRT31Q15323 416 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 TCEAL5Q5H9L2 206 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 CARD9Q9H257 536 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 SPATA2Q9UM82 520 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 GNA15P30679 374 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 EIF4A3P38919 411 aaKnown RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 PEX5P50542 639 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 DPP10Q8N608 796 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 PKD2L2Q9NZM6 624 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 POU1F1P28069 291 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 CLK1P49759 484 aaKnown RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 CNTN1Q12860 1018 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 NR1H3Q13133 447 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 BTBD9Q96Q07 612 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 ARHGEF38Q9NXL2 777 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 ITGA3P26006 1051 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 CLCN1P35523 988 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 CAMK2GQ13555 558 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 CDH18Q13634 790 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 NEK10Q6ZWH5 1172 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 GIMAP8Q8ND71 665 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 S100A13Q99584 98 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 SH3GL3Q99963 347 aa13.07□□□□□ -0.32
SLX4-201ENST00000294008 POLR3FQ9H1D9 316 aaPredicted RBP13.07□□□□□ -0.32
SLX4-201ENST00000294008 RBM7Q9Y580 266 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms