RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 CCND1P24385 295 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 NFKBIAP25963 317 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 INPP5AQ14642 412 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 EAPPQ56P03 285 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DSTYKQ6XUX3 929 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 C1orf54Q8WWF1 131 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 EPAS1Q99814 870 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PRMT1Q99873 361 aaKnown RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 MMTAG2Q9BU76 263 aaKnown RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 TRABDQ9H4I3 376 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 SENP1Q9P0U3 644 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 SASH1O94885 1247 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 FTLP02792 175 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 FGFR4P22455 802 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 BCAR1P56945 870 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 TRIP10Q15642 601 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 HEATR6Q6AI08 1181 aaKnown RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 XXYLT1Q8NBI6 393 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 LINC00116Q8NCU8 138 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 OR6P1Q8NGX9 317 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PIGOQ8TEQ8 1089 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DNAJC9Q8WXX5 260 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 OTULINQ96BN8 352 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 NLRP4Q96MN2 994 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 WDR24Q96S15 920 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PAPOLBQ9NRJ5 636 aaKnown RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PSAPP07602 524 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 STAT4Q14765 748 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 NECTIN1Q15223 517 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SNRNP27Q8WVK2 155 aaKnown RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 TEKT4Q8WW24 435 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 PCDHGB4Q9UN71 923 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 ASAP2O43150 1006 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 LDHAP00338 332 aaKnown RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 YY1P25490 414 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SDC4P31431 198 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 VCPP55072 806 aaKnown RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SLC44A4Q53GD3 710 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 CYB5D1Q6P9G0 228 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 EEPD1Q7L9B9 569 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 IFT43Q96FT9 208 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 LRRC1Q9BTT6 524 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 TRIM45Q9H8W5 580 aaPredicted RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 CYP2D7A0A087X1C5 515 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 CLRN2A0PK11 232 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 PHF20L1A8MW92 1017 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 GOLGA8RI6L899 631 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 AP1G2O75843 785 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 BTKQ06187 659 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SYDE2Q5VT97 1194 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 HDDC2Q7Z4H3 204 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SYNE4Q8N205 404 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 ZFYVE19Q96K21 471 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 CCDC134Q9H6E4 229 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 BLOC1S6Q9UL45 172 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SH3BP1Q9Y3L3 701 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 USP15Q9Y4E8 981 aaPredicted RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 E5RI56 91 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 M0R3G1 203 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 LIN7AO14910 233 aaPredicted RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 ANGPT2O15123 496 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 AKAP10O43572 662 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 HOXA13P31271 388 aaPredicted RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 DNAL1Q4LDG9 190 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 PRPF18Q99633 342 aaKnown RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 BRIP1Q9BX63 1249 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 GCOM2Q9BZD3 368 aaPredicted RBP11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 POLD4Q9HCU8 107 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 SLC9A2Q9UBY0 812 aa11.33□□□□□ -0.6
PKNOX1-201ENST00000291547 H3BQF6 201 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 AGTP01019 485 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 KRT7P08729 469 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ENO3P13929 434 aaPredicted RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CCND2P30279 289 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 SERPINB1P30740 379 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 COPB2P35606 906 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 DEFA1P59665 94 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 DEFA3P59666 94 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ACTR2P61160 394 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 RUNX1T1Q06455 604 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 DHX34Q14147 1143 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 DRAP1Q14919 205 aaPredicted RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 TRAF7Q6Q0C0 670 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 YTHDF3Q7Z739 585 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 RHOT1Q8IXI2 618 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF555Q8NEP9 628 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 PHF21AQ96BD5 680 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 HIC2Q96JB3 615 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms