RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 DRAP1Q14919 205 aaPredicted RBP18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 MORF4L2Q15014 288 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TMEM35BQ8NCS4 154 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 FBXL13Q8NEE6 735 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 STK33Q9BYT3 514 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TRIM9Q9C026 710 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TBXAS1P24557 533 aaPredicted RBP18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 SMARCA1P28370 1054 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 TRADDQ15628 312 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 ABI1Q8IZP0 508 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 PRPF31Q8WWY3 499 aaKnown RBP18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 GID8Q9NWU2 228 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 ETAA1Q9NY74 926 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 SUN2Q9UH99 717 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 BLOC1S6Q9UL45 172 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 C15orf41Q9Y2V0 281 aa18.52■□□□□ 0.55
PCDHA13-201ENST00000289272 SFI1A8K8P3 1242 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 PDIA2Q13087 525 aaKnown RBP18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 C2orf69Q8N8R5 385 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 ANKS1AQ92625 1134 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 SEPT10Q9P0V9 454 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 INO80B-WBP1J3KQ70 363 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 FCER1AP12319 257 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 EFTUD2Q15029 972 aaKnown RBP eCLIP18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 SCG3Q8WXD2 468 aaKnown RBP18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 INO80BQ9C086 356 aaPredicted RBP18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 HPSEQ9Y251 543 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 SLIT1O75093 1534 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 SYCE1LA8MT33 242 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 INPP5AQ14642 412 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 XXYLT1Q8NBI6 393 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 ACTRT1Q8TDG2 376 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 HPS3Q969F9 1004 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 VPS39Q96JC1 886 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 AGPAT1Q99943 283 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 L3MBTL1Q9Y468 752 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 FTLP02792 175 aaPredicted RBP18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 PAMP19021 973 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 FGFR4P22455 802 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 FRMD8Q9BZ67 464 aaPredicted RBP18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 MROH1Q8NDA8 1641 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 RNF103-CHMP3A0A140T963 221 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 LRRC8BQ6P9F7 803 aa18.51■□□□□ 0.55
PCDHA13-201ENST00000289272 TULP2O00295 520 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 KRT16P08779 473 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 PRELPP51888 382 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 GABPAQ06546 454 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 ERICH1Q86X53 443 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 MCPH1Q8NEM0 835 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 RXFP1Q9HBX9 757 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 PALMDQ9NP74 551 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 ASNSD1Q9NWL6 643 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 LIN7AO14910 233 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 ATP5BP06576 529 aaKnown RBP18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 CACNB3P54284 484 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 GPSM2P81274 684 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 NKX1-1Q15270 411 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 TRIM65Q6PJ69 517 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 USP49Q70CQ1 688 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 ZBED8Q8IZ13 594 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 CERKQ8TCT0 537 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 KRT82Q9NSB4 513 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 SCHIP1Q9P0W5 487 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 HIF1AQ16665 826 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 QRICH1Q2TAL8 776 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 CEP55Q53EZ4 464 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 CALN1Q9BXU9 219 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 FKBP6O75344 327 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 DDR1Q08345 913 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 ZCWPW2Q504Y3 356 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 DACT3Q96B18 629 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 SPATA31A1Q5TZJ5 1347 aa18.5■□□□□ 0.55
PCDHA13-201ENST00000289272 DAB1O75553 588 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 GNAT1P11488 350 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 KRT76Q01546 638 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 NAIF1Q69YI7 327 aaPredicted RBP18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 PDXDC2PQ6P474 469 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 ARHGAP22Q7Z5H3 698 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 RCOR2Q8IZ40 523 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 PRPF38AQ8NAV1 312 aaKnown RBP18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 HIPK4Q8NE63 616 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 ATXN2LQ8WWM7 1075 aaKnown RBP18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 ESYT2A0FGR8 921 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 PPP1R3GB7ZBB8 358 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 NFIXQ14938 502 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 LRRC34Q8IZ02 419 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 DNAAF3Q8N9W5 541 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 JADE3Q92613 823 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 STX18Q9P2W9 335 aaKnown RBP18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 AP4S1Q9Y587 144 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 AHCYL1O43865 530 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 PSMA2P25787 234 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 ZBTB10Q96DT7 871 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 ZBTB18Q99592 522 aa18.49■□□□□ 0.55
PCDHA13-201ENST00000289272 SLC4A7Q9Y6M7 1214 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms