RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 NDEL1Q9GZM8 345 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 UTP6Q9NYH9 597 aaKnown RBP16.66■□□□□ 0.26
MSI2-201ENST00000284073 TMA7Q9Y2S6 64 aaKnown RBP16.66■□□□□ 0.26
MSI2-201ENST00000284073 SSU72P8A0A1W2PR75 194 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L15C9J2P7 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L13C9JLJ4 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L11C9JVI0 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L18D6R9N7 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L22D6RA61 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L17D6RBQ6 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L19D6RCP7 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L20D6RJB6 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 KCNA2P16389 499 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L24Q0WX57 530 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 KCNMA1Q12791 1236 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 SPOUT1Q5T280 376 aaKnown RBP16.66■□□□□ 0.26
MSI2-201ENST00000284073 SYDE2Q5VT97 1194 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 ZNF408Q9H9D4 720 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 TPST1O60507 370 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 KRT7P08729 469 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 BMP3P12645 472 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 COBLL1Q53SF7 1204 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 OR6B3Q8NGW1 331 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 ORC4O43929 436 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 PLEKP08567 350 aaPredicted RBP16.66■□□□□ 0.26
MSI2-201ENST00000284073 ATP1A4Q13733 1029 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 KCNB1Q14721 858 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 ZNF667Q5HYK9 610 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 CEP78Q5JTW2 689 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 TMC5Q6UXY8 1006 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 NLRP9Q7RTR0 991 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
MSI2-201ENST00000284073 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 SUGT1Q9Y2Z0 365 aa16.66■□□□□ 0.26
MSI2-201ENST00000284073 ERVK-24P63145 666 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 OTUD4Q01804 1114 aaKnown RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 NAB2Q15742 525 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 C3orf62Q6ZUJ4 267 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 ULK4Q96C45 1275 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 DCLRE1BQ9H816 532 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 RTN2O75298 545 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 CLPTM1O96005 669 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 CHI3L2Q15782 390 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 ARL13BQ3SXY8 428 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 PLEKHA7Q6IQ23 1121 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 ZCWPW1Q9H0M4 648 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 RPF1Q9H9Y2 349 aaKnown RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 METTL5Q9NRN9 209 aaKnown RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 BLOC1S6Q9UL45 172 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 CDH6P55285 790 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 ZNF200P98182 395 aaPredicted RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 AKR1B1P15121 316 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 ALDH8A1Q9H2A2 487 aaPredicted RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 BFARQ9NZS9 450 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 ZBTB39O15060 712 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 CDK8P49336 464 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 SYDE1Q6ZW31 735 aaPredicted RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 XPO7Q9UIA9 1087 aaKnown RBP16.65■□□□□ 0.26
MSI2-201ENST00000284073 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
MSI2-201ENST00000284073 APRTP07741 180 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 RBBP7Q16576 425 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 C3orf20Q8ND61 904 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 CHORDC1Q9UHD1 332 aaPredicted RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 MYO1GB0I1T2 1018 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 EIF2B2P49770 351 aaKnown RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 OASLQ15646 514 aaKnown RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 OTULINQ96BN8 352 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 DDX56Q9NY93 547 aaKnown RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 STRNO43815 780 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 MAP3K10Q02779 954 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 PADI6Q6TGC4 694 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 IL1RAPL1Q9NZN1 696 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 ZC3H7BQ9UGR2 993 aaKnown RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 C15orf41Q9Y2V0 281 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 CCDC78A2IDD5 438 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 E7ENQ6 273 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 KCNN4O15554 427 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 TDP2O95551 362 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 ANKS1AQ92625 1134 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 CNDP1Q96KN2 507 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 DMGDHQ9UI17 866 aaKnown RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 ABCC10Q5T3U5 1492 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 PRR23D1E9PI22 279 aaPredicted RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 NBNO60934 754 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 WEE2P0C1S8 567 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 PRR23D2P0DMB1 279 aaPredicted RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 EIF2AK2P19525 551 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms