RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 FGF14Q92915 247 aa13.65□□□□□ -0.22
MRPS28-201ENST00000276585 CLDN23Q96B33 292 aa13.65□□□□□ -0.22
MRPS28-201ENST00000276585 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
MRPS28-201ENST00000276585 NLRP4Q96MN2 994 aa13.65□□□□□ -0.22
MRPS28-201ENST00000276585 JPH2Q9BR39 696 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-201ENST00000276585 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
MRPS28-201ENST00000276585 ANKEF1Q9NU02 776 aa13.65□□□□□ -0.22
MRPS28-201ENST00000276585 NBEAQ8NFP9 2946 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 MYH11P35749 1972 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 C2CD2LO14523 706 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 SPINK2P20155 84 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 RPS9P46781 194 aaKnown RBP13.64□□□□□ -0.23
MRPS28-201ENST00000276585 CDC42EP1Q00587 391 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 PFKPQ01813 784 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 LAMTOR4Q0VGL1 99 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 PSAPL1Q6NUJ1 521 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 PARM1Q6UWI2 310 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 FERMT3Q86UX7 667 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 PIGOQ8TEQ8 1089 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 PSPC1Q8WXF1 523 aaKnown RBP13.64□□□□□ -0.23
MRPS28-201ENST00000276585 NELL2Q99435 816 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 TRAIPQ9BWF2 469 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 RHOBTB2Q9BYZ6 727 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 ADAM33Q9BZ11 813 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 AGPAT5Q9NUQ2 364 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 PCDHB6Q9Y5E3 794 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 RALGAPA1Q6GYQ0 2036 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
MRPS28-201ENST00000276585 TM4SF5O14894 197 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 GLUD1P00367 558 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 ADH1AP07327 375 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 GALTP07902 379 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 SFPQP23246 707 aaKnown RBP eCLIP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 ARL2P36404 184 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 PHKA2P46019 1235 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 RNASELQ05823 741 aaKnown RBP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 CAPSQ13938 189 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 OTUD6AQ7L8S5 288 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 CATSPER3Q86XQ3 398 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 MTRQ99707 1265 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 POLR3CQ9BUI4 534 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 VN1R3Q9BXE9 311 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 PIN4Q9Y237 131 aaKnown RBP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 MRPS17Q9Y2R5 130 aaKnown RBP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 TRIP11Q15643 1979 aa13.63□□□□□ -0.23
MRPS28-201ENST00000276585 SMG1Q96Q15 3661 aaKnown RBP13.63□□□□□ -0.23
MRPS28-201ENST00000276585 URODP06132 367 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 SRGAP2CP0DJJ0 459 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 TDGF1P13385 188 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 GJB2P29033 226 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
MRPS28-201ENST00000276585 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
MRPS28-201ENST00000276585 SF3A2Q15428 464 aaKnown RBP13.62□□□□□ -0.23
MRPS28-201ENST00000276585 IL17AQ16552 155 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 ECM1Q16610 540 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 AMHR2Q16671 573 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 STPG1Q5TH74 334 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 ZNF852Q6ZMS4 543 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 MTSS1LQ765P7 747 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 CATSPER4Q7RTX7 472 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 EXOC8Q8IYI6 725 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 RNF149Q8NC42 400 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 LPPQ93052 612 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 ZNF707Q96C28 371 aaPredicted RBP13.62□□□□□ -0.23
MRPS28-201ENST00000276585 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 NRDE2Q9H7Z3 1164 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
MRPS28-201ENST00000276585 CHST12Q9NRB3 414 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 STK39Q9UEW8 545 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 INPP5FQ9Y2H2 1132 aa13.62□□□□□ -0.23
MRPS28-201ENST00000276585 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
MRPS28-201ENST00000276585 B4GALT3O60512 393 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
MRPS28-201ENST00000276585 ZNF623O75123 536 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 DGAT1O75907 488 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 SPATA31D3P0C874 917 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 GLRA2P23416 452 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 FSHRP23945 695 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 RPA1P27694 616 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 SLC11A1P49279 550 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 PTENP60484 403 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 ADCY1Q08828 1119 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 PTGDRQ13258 359 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 CUL4AQ13619 759 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 SPATA31D4Q6ZUB0 917 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 SRGAP1Q7Z6B7 1085 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 IGSF22Q8N9C0 903 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 TCP11Q8WWU5 503 aa13.61□□□□□ -0.23
MRPS28-201ENST00000276585 LSM14BQ9BX40 385 aaKnown RBP13.61□□□□□ -0.23
MRPS28-201ENST00000276585 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
MRPS28-201ENST00000276585 INO80BQ9C086 356 aaPredicted RBP13.61□□□□□ -0.23
MRPS28-201ENST00000276585 GPRC5CQ9NQ84 441 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms