RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 PALM3A6NDB9 673 aaPredicted RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RASA4BC9J798 803 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RASA4O43374 803 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 ONECUT3O60422 494 aaPredicted RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 DCTN3O75935 186 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 IL9RQ01113 521 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SLC1A5Q15758 541 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 CYP1B1Q16678 543 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 TMEM266Q2M3C6 531 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 CYFIP1Q7L576 1253 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 VPS36Q86VN1 386 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SLC44A5Q8NCS7 719 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RFWD2Q8NHY2 731 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SLC20A1Q8WUM9 679 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 MAML1Q92585 1016 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SLC35C1Q96A29 364 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SETDB2Q96T68 719 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 PHACTR1Q9C0D0 580 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 DNAJC18Q9H819 358 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 STX18Q9P2W9 335 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RPL26L1Q9UNX3 145 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SLC4A7Q9Y6M7 1214 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SYNGAP1Q96PV0 1343 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 PASKQ96RG2 1323 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 ATMINO43313 823 aaPredicted RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 MAP3K7O43318 606 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 THAP12O43422 761 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 COMTP21964 271 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 MUTP22033 750 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 ANXA13P27216 316 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RPA3P35244 121 aaPredicted RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 CDK7P50613 346 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RASSF2P50749 326 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 KRT17Q04695 432 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 OVGP1Q12889 678 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 THOC5Q13769 683 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 ARSHQ5FYA8 562 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 KRT79Q5XKE5 535 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SPTY2D1Q68D10 685 aaPredicted RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 DUS1LQ6P1R4 473 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 IZUMO2Q6UXV1 221 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 HS2ST1Q7LGA3 356 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 RIBC1Q8N443 379 aaPredicted RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 FBXO27Q8NI29 283 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 ATG4AQ8WYN0 398 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 C9orf72Q96LT7 481 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 HERPUD2Q9BSE4 406 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 ZHX3Q9H4I2 956 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 VAT1LQ9HCJ6 419 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 SEPT11Q9NVA2 429 aaKnown RBP9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 DCTN4Q9UJW0 460 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 TAF1P21675 1872 aa9.78□□□□□ -0.84
HMGCLL1-201ENST00000274901 KLRF2D3W0D1 207 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 USP1O94782 785 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 ASLP04424 464 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 ATP5DP30049 168 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 RFC4P35249 363 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 SOX5P35711 763 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 VPS41P49754 854 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 ITGA8P53708 1063 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 CHRNDQ07001 517 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 KCNA1Q09470 495 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 CALCOCO2Q13137 446 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 DRAP1Q14919 205 aaPredicted RBP9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 PPP1R21Q6ZMI0 780 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 FRMD5Q7Z6J6 570 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 ANKRD23Q86SG2 305 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLC13A5Q86YT5 568 aaPredicted RBP9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 TRIM42Q8IWZ5 723 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 C4orf33Q8N1A6 199 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 SHKBP1Q8TBC3 707 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 NAT14Q8WUY8 206 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 HAS1Q92839 578 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLX1AQ9BQ83 275 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 BTBD10Q9BSF8 475 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 YIPF2Q9BWQ6 316 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 VCX3BQ9H321 246 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 VCX3AQ9NNX9 186 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 BCS1LQ9Y276 419 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 UMODL1Q5DID0 1318 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 CFAP69A5D8W1 941 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 C2orf71A6NGG8 1288 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 TCEA3O75764 348 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 ITGA2BP08514 1039 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 XRCC5P13010 732 aaKnown RBP9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 CYP11B2P19099 503 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 FUT4P22083 530 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 ABCD1P33897 745 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 STAT1P42224 750 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 MESDQ14696 234 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 MAPK6Q16659 721 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 P3H1Q32P28 736 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 EDRF1Q3B7T1 1238 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLC45A4Q5BKX6 768 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 GPBP1Q86WP2 473 aa9.77□□□□□ -0.85
HMGCLL1-201ENST00000274901 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms