RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SCARA3Q6AZY7 606 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 DBF4BQ8NFT6 615 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 CTCFLQ8NI51 663 aaPredicted RBP11.1□□□□□ -0.63
LRTM1-201ENST00000273286 HEXIM2Q96MH2 286 aaKnown RBP11.1□□□□□ -0.63
LRTM1-201ENST00000273286 LZTS2Q9BRK4 669 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
LRTM1-201ENST00000273286 BRWD1Q9NSI6 2320 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 SIP14410 1827 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 LCHNA4D1U4 455 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 DDAH1O94760 285 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 SMIM10L2AP0DMW4 78 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 SMIM10L2BP0DMW5 78 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 GNAQP50148 359 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 NLRX1Q86UT6 975 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 SMARCC2Q8TAQ2 1214 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 GDPD5Q8WTR4 605 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
LRTM1-201ENST00000273286 SPZ1Q9BXG8 430 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 COL4A6Q14031 1691 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 PTPRSQ13332 1948 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 NRCAMQ92823 1304 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
LRTM1-201ENST00000273286 E7EWF7 191 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 CYTH3O43739 400 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 CALM1P0DP23 149 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 CALM2P0DP24 149 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 CALM3P0DP25 149 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 GSPT1P15170 499 aaKnown RBP11.09□□□□□ -0.63
LRTM1-201ENST00000273286 CHMLP26374 656 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 ZNF200P98182 395 aaPredicted RBP11.09□□□□□ -0.63
LRTM1-201ENST00000273286 SP2Q02086 613 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 TAF2Q6P1X5 1199 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 CASC1Q6TDU7 716 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 FAM43BQ6ZT52 329 aaPredicted RBP11.09□□□□□ -0.63
LRTM1-201ENST00000273286 RPAINQ86UA6 219 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 TEX2Q8IWB9 1127 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 MYOCDQ8IZQ8 938 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 IL31RAQ8NI17 732 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 TNPO1Q92973 898 aaKnown RBP11.09□□□□□ -0.63
LRTM1-201ENST00000273286 TOP1MTQ969P6 601 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 IL25Q9H293 177 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 RNPEPQ9H4A4 650 aa11.09□□□□□ -0.63
LRTM1-201ENST00000273286 TCF20Q9UGU0 1960 aaKnown RBP11.08□□□□□ -0.64
LRTM1-201ENST00000273286 MICAL3Q7RTP6 2002 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 BAZ2BQ9UIF8 2168 aaKnown RBP11.08□□□□□ -0.64
LRTM1-201ENST00000273286 PRAMEF27A3QJZ7 478 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 MAFGO15525 162 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 SGSM2O43147 1006 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 PAPLNO95428 1278 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 MRPS9P82933 396 aaKnown RBP11.08□□□□□ -0.64
LRTM1-201ENST00000273286 KRT40Q6A162 431 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 SV2BQ7L1I2 683 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 RSPH3Q86UC2 560 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 KCT2Q8NC54 265 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 MAP4K1Q92918 833 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 GPRASP2Q96D09 838 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 MRPL38Q96DV4 380 aaKnown RBP11.08□□□□□ -0.64
LRTM1-201ENST00000273286 FRMD6Q96NE9 622 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 YME1L1Q96TA2 773 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 GPR20Q99678 358 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 UBE2ZQ9H832 354 aaPredicted RBP11.08□□□□□ -0.64
LRTM1-201ENST00000273286 MTUS1Q9ULD2 1270 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 FAM50BQ9Y247 325 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 RWDD3Q9Y3V2 267 aa11.08□□□□□ -0.64
LRTM1-201ENST00000273286 REV3LO60673 3130 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.07□□□□□ -0.64
LRTM1-201ENST00000273286 NCK2O43639 380 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 GNA15P30679 374 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 INPP5AQ14642 412 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 LEXMQ3ZCV2 418 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 OGFOD2Q6N063 350 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 LRFN4Q6PJG9 635 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 ARMCX6Q7L4S7 300 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 FAM214BQ7L5A3 538 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 TMCO2Q7Z6W1 182 aaPredicted RBP11.07□□□□□ -0.64
LRTM1-201ENST00000273286 IGDCC4Q8TDY8 1250 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 GAL3ST3Q96A11 431 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 TMEM87BQ96K49 555 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 IFIH1Q9BYX4 1025 aaKnown RBP11.07□□□□□ -0.64
LRTM1-201ENST00000273286 TNKS2Q9H2K2 1166 aa11.07□□□□□ -0.64
LRTM1-201ENST00000273286 RC3H2Q9HBD1 1191 aaKnown RBP11.07□□□□□ -0.64
LRTM1-201ENST00000273286 H3BNC9 293 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 EIF4BP23588 611 aaKnown RBP11.06□□□□□ -0.64
LRTM1-201ENST00000273286 MCM5P33992 734 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 PLA2G5P39877 138 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 LIFRP42702 1097 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 ADAM17P78536 824 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 PTH1RQ03431 593 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 SLC35G1Q2M3R5 365 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 TCTN1Q2MV58 587 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 EPC2Q52LR7 807 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 TMEM31Q5JXX7 168 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.06□□□□□ -0.64
LRTM1-201ENST00000273286 MB21D2Q8IYB1 491 aaPredicted RBP11.06□□□□□ -0.64
LRTM1-201ENST00000273286 ZNF654Q8IZM8 581 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 FAM122AQ96E09 287 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms