RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 STXBP5LQ9Y2K9 1186 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 KIF4AO95239 1232 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 INSRRP14616 1297 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 CYP11B1P15538 503 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 ABCB4P21439 1286 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 PROZP22891 400 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 FMO1Q01740 532 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 MCL1Q07820 350 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 TFDP1Q14186 410 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 SEZ6Q53EL9 994 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 LINC01465Q8N7H1 131 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 LMBR1Q8WVP7 490 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 DDX1Q92499 740 aaKnown RBP17.91■□□□□ 0.46
CCDC40-201ENST00000269318 C16orf70Q9BSU1 422 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 PTPRHQ9HD43 1115 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 ARFGAP3Q9NP61 516 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 C1orf112Q9NSG2 853 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 OGFRQ9NZT2 677 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 ZNF236Q9UL36 1845 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 TARSL2A2RTX5 802 aaKnown RBP17.9■□□□□ 0.46
CCDC40-201ENST00000269318 CES2O00748 559 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 HARSP12081 509 aaKnown RBP17.9■□□□□ 0.46
CCDC40-201ENST00000269318 GZMAP12544 262 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 TNFSF9P41273 254 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 PTENP60484 403 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 TCEAL1Q15170 157 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 RPS6KA1Q15418 735 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 TSHZ1Q6ZSZ6 1077 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 MS4A14Q96JA4 679 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 ABCB6Q9NP58 842 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 SPDYE4A6NLX3 237 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 ACKR2O00590 384 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 ASAP2O43150 1006 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 PPFIA4O75335 1185 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 ITGBL1O95965 494 aaPredicted RBP17.9■□□□□ 0.46
CCDC40-201ENST00000269318 FTLP02792 175 aaPredicted RBP17.9■□□□□ 0.46
CCDC40-201ENST00000269318 MMEP08473 750 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 SMPD1P17405 629 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 PIK3CAP42336 1068 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 PAFAH1B1P43034 410 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 CDR2Q01850 454 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 MBTD1Q05BQ5 628 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 GRM1Q13255 1194 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 CFAP221Q4G0U5 840 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 DUSP28Q4G0W2 176 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 CCDC181Q5TID7 509 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 TAF3Q5VWG9 929 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 ZBTB33Q86T24 672 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 SYCE1Q8N0S2 351 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 METTL13Q8N6R0 699 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 OR5B17Q8NGF7 314 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 NPLOC4Q8TAT6 608 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 NLRP4Q96MN2 994 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 TINF2Q9BSI4 451 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 NFKBIZQ9BYH8 718 aa17.9■□□□□ 0.46
CCDC40-201ENST00000269318 SLC15A5A6NIM6 579 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 OGTO15294 1046 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 ATP8B1O43520 1251 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 RTN2O75298 545 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 TBC1D8O95759 1140 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 ZNF286BP0CG31 522 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 HOXD8P13378 290 aaPredicted RBP17.89■□□□□ 0.45
CCDC40-201ENST00000269318 HADHBP55084 474 aaKnown RBP17.89■□□□□ 0.45
CCDC40-201ENST00000269318 BIRC3Q13489 604 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 WDR44Q5JSH3 913 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 NT5DC3Q86UY8 548 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 APOBEC3GQ9HC16 384 aaKnown RBP17.89■□□□□ 0.45
CCDC40-201ENST00000269318 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
CCDC40-201ENST00000269318 CPSF3Q9UKF6 684 aaKnown RBP17.89■□□□□ 0.45
CCDC40-201ENST00000269318 COG5Q9UP83 839 aa17.89■□□□□ 0.45
CCDC40-201ENST00000269318 BUB1BO60566 1050 aaPredicted RBP17.88■□□□□ 0.45
CCDC40-201ENST00000269318 PDE6CP51160 858 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 DNA2P51530 1060 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 POU5F1BQ06416 359 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 LONRF2Q1L5Z9 754 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 BEND6Q5SZJ8 279 aaPredicted RBP17.88■□□□□ 0.45
CCDC40-201ENST00000269318 DAAM2Q86T65 1068 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 ZNF668Q96K58 619 aaPredicted RBP17.88■□□□□ 0.45
CCDC40-201ENST00000269318 TCHPQ9BT92 498 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 ABHD16BQ9H3Z7 469 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 MINDY3Q9H8M7 445 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 COL1A2P08123 1366 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 MAGEB2O15479 319 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 IQCF3P0C7M6 154 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 HUNKP57058 714 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 IGBP1P78318 339 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 ACVR2BQ13705 512 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 SPOPLQ6IQ16 392 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 MPZL3Q6UWV2 235 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 PEX26Q7Z412 305 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 WDR49Q8IV35 697 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 RHOT2Q8IXI1 618 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 HES6Q96HZ4 224 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 IFT122Q9HBG6 1241 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 NMRK2Q9NPI5 230 aa17.88■□□□□ 0.45
CCDC40-201ENST00000269318 INO80B-WBP1J3KQ70 363 aa17.87■□□□□ 0.45
CCDC40-201ENST00000269318 B4GALT5O43286 388 aa17.87■□□□□ 0.45
CCDC40-201ENST00000269318 SASH3O75995 380 aa17.87■□□□□ 0.45
CCDC40-201ENST00000269318 ACO1P21399 889 aaKnown RBP17.87■□□□□ 0.45
CCDC40-201ENST00000269318 AP3M2P53677 418 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms