RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ROR2Q01974 943 aaKnown RBP17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SLC29A2Q14542 456 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 DENND2CQ68D51 928 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 EPM2AIP1Q7L775 607 aaPredicted RBP17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NEK9Q8TD19 979 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SLC5A5Q92911 643 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PGM2Q96G03 612 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NAF1Q96HR8 494 aaKnown RBP17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 WDR11Q9BZH6 1224 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PABPC3Q9H361 631 aaKnown RBP17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IPO5O00410 1097 aaKnown RBP17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GNA14O95837 355 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 NUDT17P0C025 328 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MYCLP12524 364 aaPredicted RBP17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ITGB5P18084 799 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 NT5DC3Q86UY8 548 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EZH1Q92800 747 aaPredicted RBP17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GLG1Q92896 1179 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 KLHL29Q96CT2 875 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZDHHC18Q9NUE0 388 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ASTN1O14525 1302 aa17.08■□□□□ 0.32
MAP1LC3B-201ENST00000268607 A0A1B0GVG6 124 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SPDYE5A6NIY4 337 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CCDC169A6NNP5 214 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SPDYE16A6NNV3 312 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SNX3O60493 162 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 NR3C1P04150 777 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 BAATQ14032 418 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EDRF1Q3B7T1 1238 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CCDC38Q502W7 563 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EPAS1Q99814 870 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RAB17Q9H0T7 212 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SUCLA2Q9P2R7 463 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SYNPO2Q9UMS6 1093 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZBED4O75132 1171 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TUBP50607 506 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DR1Q01658 176 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 LRRC14Q15048 493 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EPS8L3Q8TE67 593 aaKnown RBP17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RNF146Q9NTX7 359 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZNF214Q9UL59 606 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TRAF3IP3Q9Y228 551 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SNX24Q9Y343 169 aa17.07■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FSTL1Q12841 308 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SLFN11Q7Z7L1 901 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 LXNQ9BS40 222 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 NSRP1Q9H0G5 558 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PNMA3Q9UL41 463 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 G3BP2Q9UN86 482 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TRIM33Q9UPN9 1127 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 HGSO14964 777 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TGFB1I1O43294 461 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CYP2C8P10632 490 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DSG3P32926 999 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MARSP56192 900 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MXRA7P84157 204 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PPP2R5CQ13362 524 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DUPD1Q68J44 220 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GJB7Q6PEY0 223 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FBXO25Q8TCJ0 367 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MGARPQ8TDB4 240 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ERP44Q9BS26 406 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SEMA4AQ9H3S1 761 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 KCNH7Q9NS40 1196 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ADAM22Q9P0K1 906 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 BTBD7Q9P203 1132 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DAAM1Q9Y4D1 1078 aa17.06■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TMEM150BA6NC51 233 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PDXKO00764 312 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CALUO43852 315 aaPredicted RBP17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 XRCC5P13010 732 aaKnown RBP17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SPDYCQ5MJ68 293 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PPP1R15BQ5SWA1 713 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RDH13Q8NBN7 331 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 B4GALNT2Q8NHY0 566 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 HES6Q96HZ4 224 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 OSGEPQ9NPF4 335 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FGFR1OP2Q9NVK5 253 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DBR1Q9UK59 544 aaKnown RBP17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SLC26A4O43511 780 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 UCHL3P15374 230 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 COPS2P61201 443 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 WDR78Q5VTH9 848 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GALNT15Q8N3T1 639 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TEKT4Q8WW24 435 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CCDC134Q9H6E4 229 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TYW1Q9NV66 732 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms