RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 NFRKBQ6P4R8 1299 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 RPAP3Q9H6T3 665 aaPredicted RBP12.73□□□□□ -0.37
SRRM4-201ENST00000267260 STON1Q9Y6Q2 735 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 MAGEA13PA6NCF6 341 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 TCP10L2B9ZVM9 353 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 H2AFYO75367 372 aaKnown RBP12.73□□□□□ -0.37
SRRM4-201ENST00000267260 ALBP02768 609 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 PHKA2P46019 1235 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 DLGAP2Q9P1A6 1054 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 MOSPD1Q9UJG1 213 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 CROCCQ5TZA2 2017 aa12.73□□□□□ -0.37
SRRM4-201ENST00000267260 THEMIS2Q5TEJ8 643 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 C11orf88Q6PI97 169 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 RIBC1Q8N443 379 aaPredicted RBP12.72□□□□□ -0.37
SRRM4-201ENST00000267260 RCOR1Q9UKL0 485 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 YEATS2Q9ULM3 1422 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 SAC3D1A6NKF1 404 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 LGALS16A8MUM7 142 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 PRPF3O43395 683 aaKnown RBP12.72□□□□□ -0.37
SRRM4-201ENST00000267260 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 KLHL20Q9Y2M5 609 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 TSPAN9O75954 239 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 MARK3P27448 753 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 VHLP40337 213 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
SRRM4-201ENST00000267260 LLGL1Q15334 1064 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 LINC00301Q8NCQ3 95 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 SLC1A1P43005 524 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 SAMSN1Q9NSI8 373 aaKnown RBP12.72□□□□□ -0.37
SRRM4-201ENST00000267260 ZFATQ9P243 1243 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 TALDO1P37837 337 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
SRRM4-201ENST00000267260 XPO1O14980 1071 aaKnown RBP12.72□□□□□ -0.37
SRRM4-201ENST00000267260 NCF4Q15080 339 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 P3H1Q32P28 736 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 ZMYM1Q5SVZ6 1142 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 ADAMTS1Q9UHI8 967 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 GTF2H3Q13889 308 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 MTERF2Q49AM1 385 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 NARS2Q96I59 477 aaKnown RBP12.72□□□□□ -0.37
SRRM4-201ENST00000267260 C2orf40Q9H1Z8 148 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 TRPC7Q9HCX4 862 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
SRRM4-201ENST00000267260 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 UBA6A0AVT1 1052 aaPredicted RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 GNA15P30679 374 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 FBXW10Q5XX13 1052 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 EFL1Q7Z2Z2 1120 aaKnown RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 GLMNQ92990 594 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 CLMNQ96JQ2 1002 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 KRT84Q9NSB2 600 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 IMPAD1Q9NX62 359 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 HSD17B4P51659 736 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 MAPK6Q16659 721 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 MICALL2Q8IY33 904 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 OR6P1Q8NGX9 317 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 MCRS1Q96EZ8 462 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 CDY2AQ9Y6F7 541 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 CDY1Q9Y6F8 540 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 SDC4P31431 198 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 IL13P35225 146 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 COPB2P35606 906 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 EIF2B2P49770 351 aaKnown RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 MAP4K1Q92918 833 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 SPATA16Q9BXB7 569 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 GPC3P51654 580 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 LRRC41Q15345 812 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 E4F1Q66K89 784 aaPredicted RBP12.71□□□□□ -0.37
SRRM4-201ENST00000267260 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 SERPINB13Q9UIV8 391 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 SNX24Q9Y343 169 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.37
SRRM4-201ENST00000267260 ITGAXP20702 1163 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 ARPP19P56211 112 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 AP3B2Q13367 1082 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 ANO4Q32M45 955 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 Q3C1V9 767 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.38
SRRM4-201ENST00000267260 ZCWPW2Q504Y3 356 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 ARMCX6Q7L4S7 300 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 HEATR4Q86WZ0 1026 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 ZBED8Q8IZ13 594 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 PI4KBQ9UBF8 816 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.38
SRRM4-201ENST00000267260 FAM45AQ8TCE6 357 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 NPHS2Q9NP85 383 aa12.71□□□□□ -0.38
SRRM4-201ENST00000267260 BNIP3LO60238 219 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 BCAMP50895 628 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms