RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SPIRE2Q8WWL2 714 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 NEUROG2Q9H2A3 272 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 FAM187AA6NFU0 413 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 DCDC2CA8MYV0 355 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 RTN2O75298 545 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 LRRC71Q8N4P6 559 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 KCNV2Q8TDN2 545 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 SPATA33Q96N06 139 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 ASTN1O14525 1302 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 CHUKO15111 745 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 HSPA9P38646 679 aaKnown RBP21.12■□□□□ 0.97
CSPG5-201ENST00000264723 MAPK7Q13164 816 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 SMAD1Q15797 465 aaKnown RBP21.12■□□□□ 0.97
CSPG5-201ENST00000264723 RUBCNQ92622 972 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 TARS2Q9BW92 718 aaKnown RBP21.12■□□□□ 0.97
CSPG5-201ENST00000264723 ACTR5Q9H9F9 607 aaPredicted RBP21.12■□□□□ 0.97
CSPG5-201ENST00000264723 FBXO40Q9UH90 709 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 SLFN12LQ6IEE8 588 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 OTOP1Q7RTM1 612 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 RPF1Q9H9Y2 349 aaKnown RBP21.12■□□□□ 0.97
CSPG5-201ENST00000264723 A0A1B0GUA9 196 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 PHF2O75151 1096 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 DAB2IPQ5VWQ8 1189 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 ZNF662Q6ZS27 426 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 CARD9Q9H257 536 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 SLC40A1Q9NP59 571 aa21.12■□□□□ 0.97
CSPG5-201ENST00000264723 AJAP1Q9UKB5 411 aaPredicted RBP21.12■□□□□ 0.97
CSPG5-201ENST00000264723 LAMA4Q16363 1823 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 SPEF2Q9C093 1822 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 LOC102724159A0A0B4J2E5 919 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 H0Y3Z8 333 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 PWP2Q15269 919 aaKnown RBP21.11■□□□□ 0.97
CSPG5-201ENST00000264723 BBS9Q3SYG4 887 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 LRIG3Q6UXM1 1119 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 PITPNM3Q9BZ71 974 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 TMC3Q7Z5M5 1100 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 KIRREL3Q8IZU9 778 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 SYTL5Q8TDW5 730 aaPredicted RBP21.11■□□□□ 0.97
CSPG5-201ENST00000264723 HEXIM2Q96MH2 286 aaKnown RBP21.11■□□□□ 0.97
CSPG5-201ENST00000264723 DDX20Q9UHI6 824 aaKnown RBP21.11■□□□□ 0.97
CSPG5-201ENST00000264723 H7C0C1 242 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 DGAT1O75907 488 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 ATP5OP48047 213 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 GPD1LQ8N335 351 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 LRRC8CQ8TDW0 803 aa21.11■□□□□ 0.97
CSPG5-201ENST00000264723 TGFB1I1O43294 461 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 PYGMP11217 842 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 GABPAQ06546 454 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 MYO1EQ12965 1108 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 DHX34Q14147 1143 aaKnown RBP21.1■□□□□ 0.97
CSPG5-201ENST00000264723 NEDD9Q14511 834 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 SPDYE2Q495Y8 402 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 PHLDB3Q6NSJ2 640 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 PARP9Q8IXQ6 854 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 MRPL47Q9HD33 250 aaKnown RBP21.1■□□□□ 0.97
CSPG5-201ENST00000264723 PEX19P40855 299 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 NFX1Q12986 1120 aaKnown RBP21.1■□□□□ 0.97
CSPG5-201ENST00000264723 ZCWPW2Q504Y3 356 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 OR6B2Q6IFH4 312 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 GOLGA8RI6L899 631 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 BASP1P80723 227 aaKnown RBP21.1■□□□□ 0.97
CSPG5-201ENST00000264723 XKR3Q5GH77 459 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 ERICH1Q86X53 443 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 TAS1R2Q8TE23 839 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 WDR18Q9BV38 432 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 PABPC3Q9H361 631 aaKnown RBP21.1■□□□□ 0.97
CSPG5-201ENST00000264723 PCSK1NQ9UHG2 260 aa21.1■□□□□ 0.97
CSPG5-201ENST00000264723 TLR3O15455 904 aaKnown RBP21.09■□□□□ 0.97
CSPG5-201ENST00000264723 TXNP10599 105 aaKnown RBP21.09■□□□□ 0.97
CSPG5-201ENST00000264723 MOV10L1Q9BXT6 1211 aaKnown RBP21.09■□□□□ 0.97
CSPG5-201ENST00000264723 WNT8AQ9H1J5 351 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 TMEM120BA0PK00 339 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 IL9RQ01113 521 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 PPP3CAQ08209 521 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 ALG3Q92685 438 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 SMC6Q96SB8 1091 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 CRYBG1Q9Y4K1 1723 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 MED10Q9BTT4 135 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 NGRNQ9NPE2 291 aaKnown RBP21.09■□□□□ 0.97
CSPG5-201ENST00000264723 DCTN4Q9UJW0 460 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 DIS3Q9Y2L1 958 aaKnown RBP21.09■□□□□ 0.97
CSPG5-201ENST00000264723 GNA15P30679 374 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 BACE1P56817 501 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 YWHAGP61981 247 aaKnown RBP eCLIP21.09■□□□□ 0.97
CSPG5-201ENST00000264723 ZNF667Q5HYK9 610 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 ANKMY2Q8IV38 441 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 ETNPPLQ8TBG4 499 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 TGS1Q96RS0 853 aaKnown RBP21.09■□□□□ 0.97
CSPG5-201ENST00000264723 ZSWIM1Q9BR11 485 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 PDCD2LQ9BRP1 358 aa21.09■□□□□ 0.97
CSPG5-201ENST00000264723 M0QZ92 97 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 PIK3R2O00459 728 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 FYB2Q5VWT5 728 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 IZUMO3Q5VZ72 239 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 MOXD1Q6UVY6 613 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 SLC13A5Q86YT5 568 aaPredicted RBP21.08■□□□□ 0.97
CSPG5-201ENST00000264723 RFX6Q8HWS3 928 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 C4orf33Q8N1A6 199 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 ATP8B4Q8TF62 1192 aa21.08■□□□□ 0.97
CSPG5-201ENST00000264723 TATDN2Q93075 761 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms